RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PSPHP78330 225 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 MRPS22P82650 360 aaKnown RBP16.56■□□□□ 0.24
COMMD4-222ENST00000568034 CYLC2Q14093 348 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-222ENST00000568034 NADK2Q4G0N4 442 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 CYP27C1Q4G0S4 372 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 COX20Q5RI15 118 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 SLC6A19Q695T7 634 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 DHDDSQ86SQ9 333 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 HORMAD2Q8N7B1 307 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 BCORP1Q8N888 145 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 LSM14AQ8ND56 463 aaKnown RBP16.56■□□□□ 0.24
COMMD4-222ENST00000568034 OR10G3Q8NGC4 313 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 RP9Q8TA86 221 aaKnown RBP16.56■□□□□ 0.24
COMMD4-222ENST00000568034 FAM110BQ8TC76 370 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 PNPT1Q8TCS8 783 aaKnown RBP16.56■□□□□ 0.24
COMMD4-222ENST00000568034 CDS1Q92903 461 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 SCMH1Q96GD3 660 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 CPPED1Q9BRF8 314 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-222ENST00000568034 MFRPQ9BY79 579 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 OR51I1Q9H343 314 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 IKZF5Q9H5V7 419 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 BOD1L1Q8NFC6 3051 aa16.56■□□□□ 0.24
COMMD4-222ENST00000568034 SMG1Q96Q15 3661 aaKnown RBP16.55■□□□□ 0.24
COMMD4-222ENST00000568034 PRAMEF27A3QJZ7 478 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 KCNH1O95259 989 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 FUT5Q11128 374 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 TNFAIP8L2Q6P589 184 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-222ENST00000568034 RTL4Q6ZR62 310 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
COMMD4-222ENST00000568034 ZAR1Q86SH2 424 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 DND1Q8IYX4 353 aaKnown RBP16.55■□□□□ 0.24
COMMD4-222ENST00000568034 C10orf111Q8N326 155 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 FITM2Q8N6M3 262 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 Q8NA96 180 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 GOLM1Q8NBJ4 401 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 DNAJB8Q8NHS0 232 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 GPR151Q8TDV0 419 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 ADAMTS15Q8TE58 950 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 PAQR8Q8TEZ7 354 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 RCN3Q96D15 328 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 RMND5BQ96G75 393 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-222ENST00000568034 SGCZQ96LD1 299 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 LRRC37BQ96QE4 947 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.55■□□□□ 0.24
COMMD4-222ENST00000568034 OR10H1Q9Y4A9 318 aa16.55■□□□□ 0.24
COMMD4-222ENST00000568034 CHCHD2Q9Y6H1 151 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-222ENST00000568034 TRAV17A0A0B4J275 112 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 OR6C70A6NIJ9 312 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 CLIC1O00299 241 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 HMGN4O00479 90 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 MRASO14807 208 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 ASNA1O43681 348 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 SLC25A12O75746 678 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 KCNK2O95069 426 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 KRT75O95678 551 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 IL33O95760 270 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 OR12D1P0DN82 309 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 CCL3P10147 92 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 PRDX6P30041 224 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 TMED10P49755 219 aaKnown RBP16.54■□□□□ 0.24
COMMD4-222ENST00000568034 KHKP50053 298 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 NFYCQ13952 458 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 ZNF169Q14929 603 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-222ENST00000568034 TRMT5Q32P41 509 aaKnown RBP16.54■□□□□ 0.24
COMMD4-222ENST00000568034 PLEKHN1Q494U1 663 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-222ENST00000568034 RUNDC3AQ59EK9 446 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.54■□□□□ 0.24
COMMD4-222ENST00000568034 CCNJQ5T5M9 372 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 HEPHL1Q6MZM0 1159 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 COX18Q8N8Q8 333 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 OR52N2Q8NGI0 321 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 SPPL2AQ8TCT8 520 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 RNF138Q8WVD3 245 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 RAB8BQ92930 207 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 EFHD2Q96C19 240 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-222ENST00000568034 NTNG2Q96CW9 530 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 CGREF1Q99674 301 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 BTBD2Q9BX70 525 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 IL1RL2Q9HB29 575 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 PROK2Q9HC23 129 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 FBXO34Q9NWN3 711 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 CNOT11Q9UKZ1 510 aaKnown RBP16.54■□□□□ 0.24
COMMD4-222ENST00000568034 B3GNT3Q9Y2A9 372 aa16.54■□□□□ 0.24
COMMD4-222ENST00000568034 ADAM10O14672 748 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 NME2P1O60361 137 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 REM1O75628 298 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 ZIC2O95409 532 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-222ENST00000568034 SP1P08047 785 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 ETFAP13804 333 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 NME2P22392 152 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 POU6F2P78424 691 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-222ENST00000568034 STX5Q13190 355 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 SELPLGQ14242 412 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 CAPRIN1Q14444 709 aaKnown RBP16.53■□□□□ 0.24
COMMD4-222ENST00000568034 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.53■□□□□ 0.24
COMMD4-222ENST00000568034 ZNF766Q5HY98 468 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 COLEC12Q5KU26 742 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 SLC25A25Q6KCM7 469 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 FIGNL1Q6PIW4 674 aa16.53■□□□□ 0.24
COMMD4-222ENST00000568034 ANGPTL8Q6UXH0 198 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms