RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 UHMK1Q8TAS1 419 aaKnown RBP16.92■□□□□ 0.3
LINC01238-205ENST00000567549 FAM76AQ8TAV0 307 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 EXOSC8Q96B26 276 aaKnown RBP16.92■□□□□ 0.3
LINC01238-205ENST00000567549 L3HYPDHQ96EM0 354 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 DACH2Q96NX9 599 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 ADOQ96SZ5 270 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 HBEGFQ99075 208 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 PTGES2Q9H7Z7 377 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 C3orf14Q9HBI5 128 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 SIRT5Q9NXA8 310 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 JKAMPQ9P055 326 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 PSMC3IPQ9P2W1 217 aaPredicted RBP16.92■□□□□ 0.3
LINC01238-205ENST00000567549 EIF3LQ9Y262 564 aaKnown RBP16.92■□□□□ 0.3
LINC01238-205ENST00000567549 A0A087WV62 115 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 ANXA4P09525 319 aaPredicted RBP16.91■□□□□ 0.3
LINC01238-205ENST00000567549 FOSL1P15407 271 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 DSCR4P56555 118 aaPredicted RBP16.91■□□□□ 0.3
LINC01238-205ENST00000567549 SRYQ05066 204 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 CYP27C1Q4G0S4 372 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 UNC50Q53HI1 259 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 BEND6Q5SZJ8 279 aaPredicted RBP16.91■□□□□ 0.3
LINC01238-205ENST00000567549 EMBQ6PCB8 327 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 POMZP3Q6PJE2 187 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 PAMR1Q6UXH9 720 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 SLC44A2Q8IWA5 706 aaPredicted RBP16.91■□□□□ 0.3
LINC01238-205ENST00000567549 TMEM151AQ8N4L1 468 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 MEIOBQ8N635 442 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 OR9A2Q8NGT5 310 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 RDH11Q8TC12 318 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 C16orf78Q8WTQ4 265 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 VSTM2LQ96N03 204 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 TMEM237Q96Q45 408 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 TUBA1CQ9BQE3 449 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 TMUB1Q9BVT8 246 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 ACPTQ9BZG2 426 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 TMEM216Q9P0N5 145 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 PPP4R1LQ9P1A2 415 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 PACSIN3Q9UKS6 424 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 ABCG2Q9UNQ0 655 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 ABCA4P78363 2273 aa16.91■□□□□ 0.3
LINC01238-205ENST00000567549 MPDZO75970 2070 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 CLCA1A8K7I4 914 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 PPP6CO00743 305 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 DLX3O60479 287 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 SBK3P0C264 359 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 PEPDP12955 493 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 DDCP20711 480 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 GRK2P25098 689 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 DPP4P27487 766 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 PTGDSP41222 190 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 PCYT1AP49585 367 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 GFRA1P56159 465 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 WNT3P56703 355 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 ZNF155Q12901 538 aaPredicted RBP16.9■□□□□ 0.3
LINC01238-205ENST00000567549 SNTB1Q13884 538 aaKnown RBP16.9■□□□□ 0.3
LINC01238-205ENST00000567549 DECR1Q16698 335 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 KRTAP21-3Q3LHN1 58 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 DCST1Q5T197 706 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 IKBIPQ70UQ0 350 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 HDXQ7Z353 690 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 MMP21Q8N119 569 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 WDSUB1Q8N9V3 476 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 C9orf106Q8NAJ2 232 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 SMPDL3BQ92485 455 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 NRGNQ92686 78 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 METTL2AQ96IZ6 378 aaKnown RBP16.9■□□□□ 0.3
LINC01238-205ENST00000567549 PPCSQ9HAB8 311 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 FOLH1BQ9HBA9 442 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 Q9N2J8 555 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 ZNF225Q9UK10 706 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 PLEKHA6Q9Y2H5 1048 aa16.9■□□□□ 0.3
LINC01238-205ENST00000567549 A0A1B0GTL3 188 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 TSPAN2O60636 221 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 GLRA3O75311 464 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 IFI6P09912 130 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 CT45A8P0DMV1 189 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 CT45A9P0DMV2 189 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 DDX5P17844 614 aaKnown RBP16.89■□□□□ 0.29
LINC01238-205ENST00000567549 KLK2P20151 261 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 CT45A2Q5DJT8 189 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 CFAP157Q5JU67 520 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 ADGRE4PQ86SQ3 457 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 KAT2AQ92830 837 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 INTS12Q96CB8 462 aaKnown RBP16.89■□□□□ 0.29
LINC01238-205ENST00000567549 MID1IP1Q9NPA3 183 aa16.89■□□□□ 0.29
LINC01238-205ENST00000567549 DDX18Q9NVP1 670 aaKnown RBP16.89■□□□□ 0.29
LINC01238-205ENST00000567549 AKAP6Q13023 2319 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 ITPR3Q14573 2671 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 SH3D21A4FU49 640 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 C2orf72A6NCS6 295 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 PLOD2O00469 737 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 MSTNO14793 375 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 RIPK2O43353 540 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 MYL2P10916 166 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 ZNF708P17019 499 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 ECHS1P30084 290 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 NCBP2P52298 156 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC01238-205ENST00000567549 C2orf80Q0P641 193 aa16.88■□□□□ 0.29
LINC01238-205ENST00000567549 CCDC153Q494R4 210 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms