RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 C16orf58Q96GQ5 468 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 OR7D2Q96RA2 312 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 LMF1Q96S06 567 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 STACQ99469 402 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 UTP23Q9BRU9 249 aaKnown RBP10.59□□□□□ -0.71
KARS-207ENST00000566560 RNF32Q9H0A6 362 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 OR51I1Q9H343 314 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 TPT1P8Q9HAU6 139 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 HPF1Q9NWY4 346 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 ANKRD10Q9NXR5 420 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 SLC25A37Q9NYZ2 338 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 STMN3Q9NZ72 180 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 VAPAQ9P0L0 249 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 TUBD1Q9UJT1 453 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 GPR55Q9Y2T6 319 aaPredicted RBP10.59□□□□□ -0.71
KARS-207ENST00000566560 PCDHB14Q9Y5E9 798 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 TLN1Q9Y490 2541 aaKnown RBP10.59□□□□□ -0.71
KARS-207ENST00000566560 ZZEF1O43149 2961 aa10.59□□□□□ -0.71
KARS-207ENST00000566560 LOC400499M0QZD8 3231 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 ATRXP46100 2492 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 TRBV5-3A0A0A0MS03 114 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 OR5H15A6NDH6 313 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 AIM2O14862 343 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 TO15178 435 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 ZNF354AO60765 605 aaPredicted RBP10.58□□□□□ -0.72
KARS-207ENST00000566560 OR6B1O95007 311 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 NKX2-2O95096 273 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 IL2RAP01589 272 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 C1QCP02747 245 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 PDGFAP04085 211 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 MATN1P21941 496 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 PPIBP23284 216 aaKnown RBP10.58□□□□□ -0.72
KARS-207ENST00000566560 ABCD3P28288 659 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 IL12BP29460 328 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 GABRA3P34903 492 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 TRHRP34981 398 aaPredicted RBP10.58□□□□□ -0.72
KARS-207ENST00000566560 KRT20P35900 424 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CPA2P48052 419 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CYB561P49447 251 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 NUDT2P50583 147 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 TUBA3CQ13748 450 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CAPRIN1Q14444 709 aaKnown RBP10.58□□□□□ -0.72
KARS-207ENST00000566560 LACTB2Q53H82 288 aaPredicted RBP10.58□□□□□ -0.72
KARS-207ENST00000566560 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.58□□□□□ -0.72
KARS-207ENST00000566560 TUBA3EQ6PEY2 450 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 IGFL2Q6UWQ7 119 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 DLEU7Q6UYE1 221 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 GPALPP1Q8IXQ4 340 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CYP4Z2PQ8N1L4 340 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 SLC15A4Q8N697 577 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 MIPOL1Q8TD10 442 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 PIK3R3Q92569 461 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CDS1Q92903 461 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 TMBIM1Q969X1 311 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 SPACA9Q96E40 222 aaPredicted RBP10.58□□□□□ -0.72
KARS-207ENST00000566560 OMA1Q96E52 524 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CGREF1Q99674 301 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CPPED1Q9BRF8 314 aaPredicted RBP10.58□□□□□ -0.72
KARS-207ENST00000566560 SLC39A3Q9BRY0 314 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 PIGUQ9H490 435 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 RAD21L1Q9H4I0 556 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 ZBTB20Q9HC78 741 aaPredicted RBP10.58□□□□□ -0.72
KARS-207ENST00000566560 DUSP22Q9NRW4 184 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 PLA2G3Q9NZ20 509 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 TAGLN3Q9UI15 199 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CBLCQ9ULV8 474 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 CORO2BQ9UQ03 480 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 PCDHGB7Q9Y5F8 929 aa10.58□□□□□ -0.72
KARS-207ENST00000566560 GXYLT2A0PJZ3 443 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 K7EM74 188 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 FXYD1O00168 92 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 CLIC1O00299 241 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 ASNA1O43681 348 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 PPM1BO75688 479 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 UNC5CO95185 931 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 CBX6O95503 412 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 OR12D1P0DN82 309 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 MAP3K8P41279 467 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 CRATP43155 626 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 RFX3P48380 749 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 MAN2A2P49641 1150 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 HLCSP50747 726 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 MTPNP58546 118 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 POU6F2P78424 691 aaPredicted RBP10.57□□□□□ -0.72
KARS-207ENST00000566560 MRPS22P82650 360 aaKnown RBP10.57□□□□□ -0.72
KARS-207ENST00000566560 TXNL4AP83876 142 aaKnown RBP10.57□□□□□ -0.72
KARS-207ENST00000566560 FADDQ13158 208 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 KRT72Q14CN4 511 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 OR1C1Q15619 314 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 DECR1Q16698 335 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 CYP27C1Q4G0S4 372 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 COX20Q5RI15 118 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 ATAD3BQ5T9A4 648 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 ZNF468Q5VIY5 522 aaPredicted RBP10.57□□□□□ -0.72
KARS-207ENST00000566560 ASB18Q6ZVZ8 466 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 TRPM8Q7Z2W7 1104 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 C16orf62Q7Z3J2 963 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 HPS6Q86YV9 775 aa10.57□□□□□ -0.72
KARS-207ENST00000566560 DND1Q8IYX4 353 aaKnown RBP10.57□□□□□ -0.72
KARS-207ENST00000566560 ZADH2Q8N4Q0 377 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms