RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SCYL2Q6P3W7 929 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 RHBDF2Q6PJF5 856 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 GFRALQ6UXV0 394 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF562Q6V9R5 426 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 G2E3Q7L622 706 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 NLRP9Q7RTR0 991 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 DHDDSQ86SQ9 333 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ITIH5Q86UX2 942 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 CACUL1Q86Y37 369 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 DCP1BQ8IZD4 617 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 NAGSQ8N159 534 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 FBXL14Q8N1E6 418 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 CCDC185Q8N715 623 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 MAPKAPK5-AS1Q8N8E1 139 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 Q8N9G6 341 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ASCC1Q8N9N2 400 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF383Q8NA42 475 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 MFSD9Q8NBP5 474 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 OR2T12Q8NG77 320 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 OR4F17Q8NGA8 305 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 OR51G2Q8NGK0 314 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 OR13F1Q8NGS4 319 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 OR4F5Q8NH21 305 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 OR1F12Q8NHA8 337 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 CNIH3Q8TBE1 160 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 NANPQ8TBE9 248 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 HCAR2Q8TDS4 363 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 GPX8Q8TED1 209 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF473Q8WTR7 871 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 MAIP1Q8WWC4 291 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 HSD17B8Q92506 261 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SLCO2A1Q92959 643 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 C18orf25Q96B23 403 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 TADA1Q96BN2 335 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SGK3Q96BR1 496 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 HMCESQ96FZ2 354 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 TIMD4Q96H15 378 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 PPP1R16AQ96I34 528 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 C10orf90Q96M02 699 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC38A2Q96QD8 506 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 OR4F4Q96R69 305 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 TTYH2Q9BSA4 534 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 CCM2Q9BSQ5 444 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 RPP25Q9BUL9 199 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 C20orf24Q9BUV8 137 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 TRIM62Q9BVG3 475 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 RAB11FIP5Q9BXF6 653 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 QTRT1Q9BXR0 403 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 LRRN3Q9H3W5 708 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 R3HDMLQ9H3Y0 253 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 LRRC4Q9HBW1 653 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 POLD4Q9HCU8 107 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 TREM1Q9NP99 234 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC17A5Q9NRA2 495 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 GPR83Q9NYM4 423 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 NLGN3Q9NZ94 848 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 MTCH1Q9NZJ7 389 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF224Q9NZL3 707 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 GHRLQ9UBU3 117 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF639Q9UID6 485 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 RALYQ9UKM9 306 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 AGO1Q9UL18 857 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 VANGL2Q9ULK5 521 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 PRPF19Q9UMS4 504 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ABCG2Q9UNQ0 655 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 VDAC3Q9Y277 283 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 RHBDD3Q9Y3P4 386 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 TIMM10BQ9Y5J6 103 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 NPTNQ9Y639 398 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 BZW2Q9Y6E2 419 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 WDR97A6NE52 1622 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 NHSL1Q5SYE7 1610 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 CCDC7Q96M83 1385 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 MAGI1Q96QZ7 1491 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 UMODL1Q5DID0 1318 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 COL4A3Q01955 1670 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 KIF27Q86VH2 1401 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PPIAL4EA0A075B759 164 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TRAV25A0A0B4J276 109 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 A0A0J9YVX5 310 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 LRP5LA4QPB2 252 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TUBAL3A6NHL2 446 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GABRR3A8MPY1 467 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TMCO5BA8MYB1 307 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 INAFM1C9JVW0 142 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 ANHXE9PGG2 379 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 HAS3O00219 553 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PSMD11O00231 422 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 BTN3A3O00478 584 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 IMPA2O14732 288 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 BCKDKO14874 412 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 EIF3HO15372 352 aaKnown RBP eCLIP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 P2RX6O15547 441 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 SPRY3O43610 288 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 XPNPEP2O43895 674 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TSPAN2O60636 221 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 KCNJ13O60928 360 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 SH3BGRLO75368 114 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms