RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 STARP49675 285 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 NCBP2P52298 156 aaKnown RBP eCLIP16.63■□□□□ 0.25
USB1-213ENST00000566292 ART1P52961 327 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 IST1P53990 364 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 DNAJB13P59910 316 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 SRYQ05066 204 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 ZNF155Q12901 538 aaPredicted RBP16.63■□□□□ 0.25
USB1-213ENST00000566292 IMPG1Q17R60 797 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 CCDC153Q494R4 210 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 IFNEQ86WN2 208 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 LRRC46Q96FV0 321 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 STMN4Q9H169 189 aaPredicted RBP16.63■□□□□ 0.25
USB1-213ENST00000566292 LIME1Q9H400 295 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 RASSF1Q9NS23 344 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 TAS2R7Q9NYW3 318 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 JKAMPQ9P055 326 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 FOXD3Q9UJU5 478 aaPredicted RBP16.63■□□□□ 0.25
USB1-213ENST00000566292 CBLCQ9ULV8 474 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 CCL27Q9Y4X3 112 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 SETD2Q9BYW2 2564 aaPredicted RBP16.63■□□□□ 0.25
USB1-213ENST00000566292 MAP1AP78559 2803 aaPredicted RBP16.63■□□□□ 0.25
USB1-213ENST00000566292 MTORP42345 2549 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 ABCA4P78363 2273 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 A0A087WV62 115 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 A6NNC1 897 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 H0Y3Z8 333 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 ZIC3O60481 467 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 RSL1D1O76021 490 aaKnown RBP16.62■□□□□ 0.25
USB1-213ENST00000566292 IL18BPO95998 194 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 TMIGD3P0DMS9 266 aaPredicted RBP16.62■□□□□ 0.25
USB1-213ENST00000566292 GRK2P25098 689 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 TACR1P25103 407 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 CRHR1P34998 444 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 OPRM1P35372 400 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 LHX2P50458 406 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 NAA20P61599 178 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 PSPHP78330 225 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 FOXF2Q12947 444 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 NOXRED1Q6NXP6 359 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 ENPP6Q6UWR7 440 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 TMEM107Q6UX40 140 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 TDRPQ86YL5 185 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 FAM76AQ8TAV0 307 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 FAM222BQ8WU58 562 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 UCN2Q96RP3 112 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 GLIPR2Q9H4G4 154 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 MIEF1Q9NQG6 463 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 OXSMQ9NWU1 459 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 GRID1Q9ULK0 1009 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 C19orf53Q9UNZ5 99 aaPredicted RBP16.62■□□□□ 0.25
USB1-213ENST00000566292 OR10H1Q9Y4A9 318 aa16.62■□□□□ 0.25
USB1-213ENST00000566292 PRRC2AP48634 2157 aaKnown RBP16.62■□□□□ 0.25
USB1-213ENST00000566292 SMIM23A6NLE4 172 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 CLCA1A8K7I4 914 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 EEF1E1-BLOC1S5C9J1V9 151 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 H3BQF6 201 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 UPK1AO00322 258 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 PLOD2O00469 737 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 EEF1E1O43324 174 aaKnown RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 COQ9O75208 318 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 CRCPO75575 148 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 PSMG1O95456 288 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 CD1EP15812 388 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 TCEA1P23193 301 aaKnown RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 CCT5P48643 541 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 DGKQP52824 942 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 CLDN18P56856 261 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 KIAA0040Q15053 153 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 CFAP157Q5JU67 520 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 SH2D4BQ5SQS7 431 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 EIF1ADQ8N9N8 165 aaKnown RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 EPS8L3Q8TE67 593 aaKnown RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 UBLCP1Q8WVY7 318 aaPredicted RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 EGLN2Q96KS0 407 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 SFXN2Q96NB2 322 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 AMDHD1Q96NU7 426 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 CLEC4MQ9H2X3 399 aaPredicted RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 RRAGDQ9NQL2 400 aaPredicted RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 FLRT3Q9NZU0 649 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 CLCF1Q9UBD9 225 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 DKKL1Q9UK85 242 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 MRPS18CQ9Y3D5 142 aaKnown RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 PTGDR2Q9Y5Y4 395 aa16.61■□□□□ 0.25
USB1-213ENST00000566292 ZNF469Q96JG9 3925 aaPredicted RBP16.61■□□□□ 0.25
USB1-213ENST00000566292 SLITRK5O94991 958 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 RCBTB2O95199 551 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 UROSP10746 265 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 CPA3P15088 417 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 ZNF708P17019 499 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 DPP4P27487 766 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 NTSP30990 170 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 EVI2BP34910 448 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 B3GALT5-AS1P59052 145 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 CLEC6AQ6EIG7 209 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 AAGABQ6PD74 315 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 OR2L13Q8N349 312 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 FADS6Q8N9I5 356 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 CCDC63Q8NA47 563 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 LINC01560Q8TB33 94 aa16.6■□□□□ 0.25
USB1-213ENST00000566292 ELP4Q96EB1 424 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms