RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CRYABP02511 175 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 ICAM1P05362 532 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GABRA1P14867 456 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 IDSP22304 550 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 EVX1P49640 407 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CRISP1P54107 249 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SLC26A5P58743 744 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TLE2Q04725 743 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 KRBOX4Q5JUW0 171 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 C6orf136Q5SQH8 315 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TMEM164Q5U3C3 297 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MEDAGQ5VYS4 303 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TCTEX1D2Q8WW35 142 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 EDEM1Q92611 657 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TCEAL4Q96EI5 215 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 HSH2DQ96JZ2 352 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TMEM68Q96MH6 324 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 UTP23Q9BRU9 249 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 EGLN1Q9GZT9 426 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MFFQ9GZY8 342 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SLC6A13Q9NSD5 602 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SPATA6Q9NWH7 488 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 COPZ2Q9P299 210 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 BTNL2Q9UIR0 455 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LAMA4Q16363 1823 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ENTPD6O75354 484 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 IFNGP01579 166 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CHRNA4P43681 627 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RGS4P49798 205 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SELENOPP49908 381 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RPL23AP62750 156 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 ST3GAL4Q11206 333 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PROX2Q3B8N5 592 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ACER2Q5QJU3 275 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PAPD4Q6PIY7 484 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZNF730Q6ZMV8 503 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZDHHC21Q8IVQ6 265 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 DMBX1Q8NFW5 382 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 OR51A7Q8NH64 312 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 OSMRQ99650 979 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SPAG8Q99932 426 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 POPDC3Q9HBV1 291 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 EPHA6Q9UF33 1036 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 BAZ2BQ9UIF8 2168 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 C9orf170A2RU37 121 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 J3KR12 359 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MANBAO00462 879 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GPR171O14626 319 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FARS2O95363 451 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 GHRHP01286 108 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GP1BAP07359 652 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ALPPL2P10696 532 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZNF37AP17032 561 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 OTX1P32242 354 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 BMI1P35226 326 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ADRA1AP35348 466 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZNF792Q3KQV3 632 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZNF528Q3MIS6 628 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TMEM201Q5SNT2 666 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NAPEPLDQ6IQ20 393 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SUSD1Q6UWL2 747 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RNF113BQ8IZP6 322 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 DNAJC5GQ8N7S2 189 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CREB3L4Q8TEY5 395 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TRAPPC12Q8WVT3 735 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TSEN15Q8WW01 171 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 UBE2FQ969M7 185 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SCRN2Q96FV2 425 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CDCA3Q99618 268 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 COLEC11Q9BWP8 271 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TFB2MQ9H5Q4 396 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 WDCPQ9H6R7 721 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 IMP3Q9NV31 184 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 PLEKHA6Q9Y2H5 1048 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TRPM7Q96QT4 1865 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ELOVL7A1L3X0 281 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 POM121BA6NF01 834 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TVP23AA6NH52 213 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RGS14O43566 566 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GCM2O75603 506 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 HPP00738 406 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PLGP00747 810 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 SMPD1P17405 629 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 DNASE1P24855 282 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CHRNB4P30926 498 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TNFSF9P41273 254 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RAB9AP51151 201 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PUM1Q14671 1186 aaKnown RBP eCLIP2.76□□□□□ -1.975e-7■■□□□ 11.8
CHD9-218ENST00000566029 MPEG1Q2M385 716 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GOLGA7BQ2TAP0 167 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 HECTD2Q5U5R9 776 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NPAS4Q8IUM7 802 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TMEM132CQ8N3T6 1108 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MS4A15Q8N5U1 240 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CHST13Q8NET6 341 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 OR6C4Q8NGE1 309 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SLC41A3Q96GZ6 507 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZNF382Q96SR6 550 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MFRPQ9BY79 579 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NFKBIZQ9BYH8 718 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms