RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 HECTD1Q9ULT8 2610 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 A0A1B0GTH9 108 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 C9JVG2 144 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 PDE9AO76083 593 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 SNX4O95219 450 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 IDO1P14902 403 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 CASP3P42574 277 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 MAGEA5P43359 124 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 KIR3DL1P43629 444 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 PRKAG1P54619 331 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 SLC10A1Q14973 349 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 GSTA3Q16772 222 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 DPY19L1Q2PZI1 675 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 PDCD4Q53EL6 469 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 SPANXN4Q5MJ08 99 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 ARHGAP11AQ6P4F7 1023 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 TMEM81Q6P7N7 255 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 WDR53Q7Z5U6 358 aaPredicted RBP12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 CHERPQ8IWX8 916 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 CLECL1Q8IZS7 167 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 HOXB13Q92826 284 aaPredicted RBP12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 HGDQ93099 445 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 TMBIM1Q969X1 311 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 FAM120BQ96EK7 910 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 GIMAP5Q96F15 307 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 LMF2Q9BU23 707 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 CCDC28BQ9BUN5 200 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 ANGPTL4Q9BY76 406 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 CXorf36Q9H7Y0 433 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 EQTNQ9NQ60 294 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 TCF7L2Q9NQB0 619 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 ARHGAP21Q5T5U3 1957 aa12.68□□□□□ -0.38
HERPUD1-210ENST00000565966 OR6C70A6NIJ9 312 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 E9PBE3 544 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 RNASET2O00584 256 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 CCL21O00585 134 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 PRRG2O14669 202 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 POLR3GO15318 223 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 TSPAN2O60636 221 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 ABCB7O75027 752 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 TRIM3O75382 744 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 REM1O75628 298 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 IGHG3P01860 377 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 RNF224P0DH78 156 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 S100A3P33764 101 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 PTGS2P35354 604 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 KRT20P35900 424 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 MAP3K8P41279 467 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 PNLIPRP2P54317 469 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 HBA1P69905 142 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 SNTA1Q13424 505 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 C3AR1Q16581 482 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 FAM174BQ3ZCQ3 159 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 BICRALQ6AI39 1079 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 DESI1Q6ICB0 168 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 MTFR2Q6P444 385 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 SZRD1Q7Z422 152 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 FGD2Q7Z6J4 655 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 PACS2Q86VP3 889 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 OR4N2Q8NGD1 307 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 TMCO6Q96DC7 493 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 THOC1Q96FV9 657 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 SLC35A4Q96G79 324 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 ZNF597Q96LX8 424 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 RILPQ96NA2 401 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 MS4A4EQ96PG1 132 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 SDR39U1Q9NRG7 319 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 ZCCHC3Q9NUD5 404 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 QPCTLQ9NXS2 382 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 SUCOQ9UBS9 1254 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 SH3BGRL2Q9UJC5 107 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 SNX8Q9Y5X2 465 aa12.67□□□□□ -0.38
HERPUD1-210ENST00000565966 PRSS51A0A1B0GVH4 220 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 TTC36A6NLP5 189 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 CFLARO15519 480 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 ZNHIT1O43257 154 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 UGT2B11O75310 529 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 SLC22A3O75751 556 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 NKX2-2O95096 273 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 RFPL3SP0C7P2 107 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 ACP2P11117 423 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 ESRRAP11474 423 aaPredicted RBP12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 ZFP36L2P47974 494 aaKnown RBP12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 DGKQP52824 942 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 PRR5P85299 388 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 GUCY1A3Q02108 690 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 GAB1Q13480 694 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 EFR3AQ14156 821 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 ZNHIT3Q15649 155 aaPredicted RBP12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 CYP27C1Q4G0S4 372 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 EXOSC6Q5RKV6 272 aaKnown RBP12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 ANXA8L1Q5VT79 327 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 MFSD12Q6NUT3 480 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 SLC30A6Q6NXT4 461 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 ANKRD46Q86W74 232 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 CDRT4Q8N9R6 151 aa12.66□□□□□ -0.38
HERPUD1-210ENST00000565966 GLB1L3Q8NCI6 653 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms