RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ACTR6Q9GZN1 396 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 PITHD1Q9GZP4 211 aaPredicted RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 NT5DC2Q9H857 520 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 RNF122Q9H9V4 155 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 PRDM7Q9NQW5 492 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 CISD1Q9NZ45 108 aaKnown RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 SLC17A6Q9P2U8 582 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 HEY2Q9UBP5 337 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 DCDC2Q9UHG0 476 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 ERVK-19Q9WJR5 959 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 SLC22A14Q9Y267 594 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 FREM3P0C091 2139 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 DYSFO75923 2080 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 HMX2A2RU54 273 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 C2orf72A6NCS6 295 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 SYCE1LA8MT33 242 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 TRIM49D1C9J1S8 452 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 KLHL2O95198 593 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 GUCA1CO95843 209 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 TGFAP01135 160 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 ABCB1P08183 1280 aaPredicted RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 GSTA1P08263 222 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 RBP1P09455 135 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 SLC35E2BP0CK96 405 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 ALOX15P16050 662 aaPredicted RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 GCAP28676 217 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 SRD5A2P31213 254 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 TLX1P31314 330 aaPredicted RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 MAGEA12P43365 314 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 HNMTP50135 292 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 NEK2P51955 445 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 RPS13P62277 151 aaKnown RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 CR1LQ2VPA4 569 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 ADPRMQ3LIE5 342 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 BEND6Q5SZJ8 279 aaPredicted RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 TMEM81Q6P7N7 255 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 LRIG3Q6UXM1 1119 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 DGAT2L6Q6ZPD8 337 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 DTX2Q86UW9 622 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 STK32CQ86UX6 486 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 GPSM1Q86YR5 675 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 ST13P4Q8IZP2 240 aaPredicted RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 STEAP2Q8NFT2 490 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 UHMK1Q8TAS1 419 aaKnown RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 STAG3L4Q8TBR4 150 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 HSD17B8Q92506 261 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 FIG4Q92562 907 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 NEUROG1Q92886 237 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 MSI2Q96DH6 328 aaKnown RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 MRRFQ96E11 262 aaKnown RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 LINGO1Q96FE5 620 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 F2RL3Q96RI0 385 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 MAPKAP1Q9BPZ7 522 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 TBCDQ9BTW9 1192 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 OCEL1Q9H607 264 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 RPF2Q9H7B2 306 aaKnown RBP8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 ZNF696Q9H7X3 374 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 MANSC1Q9H8J5 431 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 MS4A12Q9NXJ0 267 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 SENP1Q9P0U3 644 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 CTNNAL1Q9UBT7 734 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 METRNQ9UJH8 293 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 TMCO1Q9UM00 188 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 DTX4Q9Y2E6 619 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 EMC9Q9Y3B6 208 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 ZNF175Q9Y473 711 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 NCKAP5O14513 1909 aa8.11□□□□□ -1.11
VPS9D1-205ENST00000565452 MED12Q93074 2177 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 A0A096LPK6 155 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 TMEM89A2RUT3 159 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 FGF17O60258 216 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 CSF3P09919 207 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 CD1DP15813 335 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 IL11P20809 199 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 GALNSP34059 522 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 CCT5P48643 541 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 CTBP2P56545 445 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 SPRED3Q2MJR0 410 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 AP5B1Q2VPB7 878 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 MIDNQ504T8 468 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 METTL2BQ6P1Q9 378 aaKnown RBP8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 ISCA2Q86U28 154 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 PLCZ1Q86YW0 608 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 UBQLNLQ8IYU4 475 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 TCAIMQ8N3R3 496 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 ACOT4Q8N9L9 421 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 BANPQ8N9N5 519 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 WDSUB1Q8N9V3 476 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 C10orf105Q8TEF2 133 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 DOK4Q8TEW6 326 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 KAT2AQ92830 837 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 USB1Q9BQ65 265 aaKnown RBP8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 CAPS2Q9BXY5 557 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 CAB39LQ9H9S4 337 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 KLRF1Q9NZS2 232 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 LGALS13Q9UHV8 139 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 OARD1Q9Y530 152 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 TRRAPQ9Y4A5 3859 aa8.1□□□□□ -1.11
VPS9D1-205ENST00000565452 TLDC2A0PJX2 215 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 FAM157AC9JC47 383 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms