RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 ZIC3O60481 467 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 TSPAN2O60636 221 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 ULK1O75385 1050 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 TNFRSF21O75509 655 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 LY6G6DO95868 133 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 TGM6O95932 706 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 POU2F1P14859 743 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 TAC1P20366 129 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 RPS3AP61247 264 aaKnown RBP12.86□□□□□ -0.35
COMMD4-211ENST00000564815 PPP2R2BQ00005 443 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 LTB4RQ15722 352 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 LGSNQ5TDP6 509 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 SLC44A2Q8IWA5 706 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-211ENST00000564815 SIMC1Q8NDZ2 872 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 MTBPQ96DY7 904 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-211ENST00000564815 NSUN5Q96P11 429 aaKnown RBP12.86□□□□□ -0.35
COMMD4-211ENST00000564815 CCL19Q99731 98 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 MRPL46Q9H2W6 279 aaKnown RBP12.86□□□□□ -0.35
COMMD4-211ENST00000564815 UBTD1Q9HAC8 227 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 HHATLQ9HCP6 504 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 FARSBQ9NSD9 589 aaKnown RBP12.86□□□□□ -0.35
COMMD4-211ENST00000564815 KLHL28Q9NXS3 571 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 XPR1Q9UBH6 696 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 MED12LQ86YW9 2145 aa12.86□□□□□ -0.35
COMMD4-211ENST00000564815 EMC8O43402 210 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 PLOD3O60568 738 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 CT45A8P0DMV1 189 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 CT45A9P0DMV2 189 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 HK1P19367 917 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 CRYGSP22914 178 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 GSTM5P46439 218 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 CDH13P55290 713 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 CSTF3Q12996 717 aaKnown RBP12.85□□□□□ -0.35
COMMD4-211ENST00000564815 GANABQ14697 944 aaKnown RBP12.85□□□□□ -0.35
COMMD4-211ENST00000564815 RASA2Q15283 850 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 TRADDQ15628 312 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 CYP27C1Q4G0S4 372 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 CT45A2Q5DJT8 189 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 ZNF628Q5EBL2 1059 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 TEX35Q5T0J7 233 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 RAET1LQ5VY80 246 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 YTHDF3Q7Z739 585 aaKnown RBP12.85□□□□□ -0.35
COMMD4-211ENST00000564815 UBQLNLQ8IYU4 475 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 KAT2AQ92830 837 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 ARSGQ96EG1 525 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 Q96MF0 132 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 BBS4Q96RK4 519 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 G6PC3Q9BUM1 346 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 DSN1Q9H410 356 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 STK38LQ9Y2H1 464 aa12.85□□□□□ -0.35
COMMD4-211ENST00000564815 A0A1W2PPR1 153 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 H7C1Q1 480 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 COQ9O75208 318 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 RPS17P08708 135 aaKnown RBP12.84□□□□□ -0.35
COMMD4-211ENST00000564815 TBXA2RP21731 343 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
COMMD4-211ENST00000564815 HMOX2P30519 316 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 UGT2B10P36537 528 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 HSD17B3P37058 310 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 PSMD4P55036 377 aaKnown RBP12.84□□□□□ -0.35
COMMD4-211ENST00000564815 OCRLQ01968 901 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 CLCQ05315 142 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 ACSM2AQ08AH3 577 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 SGCBQ16585 318 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 GLYR1Q49A26 553 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-211ENST00000564815 SPIN4Q56A73 249 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 ACSM2BQ68CK6 577 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 FAM180BQ6P0A1 224 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 LETMD1Q6P1Q0 360 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 PLXDC2Q6UX71 529 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 BTLAQ7Z6A9 289 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 KRTAP1-3Q8IUG1 177 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 FAM9CQ8IZT9 166 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 OR9A2Q8NGT5 310 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 METTL6Q8TCB7 284 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 ZNF483Q8TF39 744 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-211ENST00000564815 GFM2Q969S9 779 aaKnown RBP12.84□□□□□ -0.35
COMMD4-211ENST00000564815 EXOSC8Q96B26 276 aaKnown RBP12.84□□□□□ -0.35
COMMD4-211ENST00000564815 COX4I2Q96KJ9 171 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 PIGQQ9BRB3 760 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 C1QTNF3Q9BXJ4 246 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 PRRG4Q9BZD6 226 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 FOLH1BQ9HBA9 442 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 SLC35C2Q9NQQ7 365 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 HEY2Q9UBP5 337 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 PROCRQ9UNN8 238 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 ZNF175Q9Y473 711 aa12.84□□□□□ -0.35
COMMD4-211ENST00000564815 ZNF469Q96JG9 3925 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-211ENST00000564815 EXPH5Q8NEV8 1989 aa12.83□□□□□ -0.35
COMMD4-211ENST00000564815 MANBAO00462 879 aa12.83□□□□□ -0.36
COMMD4-211ENST00000564815 SMAD7O15105 426 aaKnown RBP12.83□□□□□ -0.36
COMMD4-211ENST00000564815 PCDH7O60245 1069 aa12.83□□□□□ -0.36
COMMD4-211ENST00000564815 SUPT7LO94864 414 aa12.83□□□□□ -0.36
COMMD4-211ENST00000564815 SLITRK5O94991 958 aa12.83□□□□□ -0.36
COMMD4-211ENST00000564815 OR4F21O95013 312 aa12.83□□□□□ -0.36
COMMD4-211ENST00000564815 IL3P08700 152 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms