RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 SPATA24Q86W54 205 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 MMD2Q8IY49 270 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 KIF2BQ8N4N8 673 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 PSMA8Q8TAA3 256 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ACER1Q8TDN7 264 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 NAT14Q8WUY8 206 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 TAF4BQ92750 862 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 SYN2Q92777 582 aaPredicted RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 FAM122AQ96E09 287 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ZNF274Q96GC6 653 aaPredicted RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 DHTKD1Q96HY7 919 aaPredicted RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 GUCD1Q96NT3 240 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 TMEM237Q96Q45 408 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 HNRNPABQ99729 332 aaKnown RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 KATNB1Q9BVA0 655 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ZMYND12Q9H0C1 365 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 STMN4Q9H169 189 aaPredicted RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 BOLA2Q9H3K6 86 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 TLE6Q9H808 572 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 SLC38A10Q9HBR0 1119 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 MYNNQ9NPC7 610 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 INIPQ9NRY2 104 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ETNK2Q9NVF9 386 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 FAIMQ9NVQ4 179 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 EURLQ9NYK6 297 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 CNIH4Q9P003 139 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 EPS15L1Q9UBC2 864 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 CPSF3Q9UKF6 684 aaKnown RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 RPL26L1Q9UNX3 145 aaKnown RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 ARL2BPQ9Y2Y0 163 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 FADS3Q9Y5Q0 445 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 PRUNE2Q8WUY3 3088 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 A0A0G2JMZ2 1700 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 SIPA1L1O43166 1804 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 LTBP2Q14767 1821 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 MYO5AQ9Y4I1 1855 aaKnown RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 MACROD2A1Z1Q3 448 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 TRIM49BA6NDI0 452 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SHISA7A6NL88 538 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SNURFLB1AK76 121 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 FAM86B1E9PN63 330 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 PGRMC2O15173 223 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 RGS16O15492 202 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 RNF113AO15541 343 aaKnown RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 TTI1O43156 1089 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SNX3O60493 162 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 PEX11AO75192 247 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 PGLSO95336 258 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 CTDNEP1O95476 244 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 NDUFB10O96000 172 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 C9P02748 559 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 PGK2P07205 417 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 LYNP07948 512 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 FAM86B2P0C5J1 330 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 UBTFL6P0CB48 400 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 ZCCHC18P0CG32 403 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 IRF2P14316 349 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 CD22P20273 847 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 IL10P22301 178 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SOX3P41225 446 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 MAGEA1P43355 309 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 OR3A2P47893 321 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 ACADVLP49748 655 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 MFAP3P55082 362 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 STARD6P59095 220 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 BPIFB3P59826 476 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 ST8SIA6P61647 398 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SLC34A1Q06495 639 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 C17orf67Q0P5P2 114 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 RPA4Q13156 261 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 ZNF177Q13360 481 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 CUL1Q13616 776 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 LASP1Q14847 261 aaKnown RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 ZCWPW2Q504Y3 356 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 MFSD12Q6NUT3 480 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 LRRC8BQ6P9F7 803 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 CNSTQ6PJW8 725 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 BAIAP2L2Q6UXY1 529 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 TMEM182Q6ZP80 229 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 ASRGL1Q7L266 308 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 FCRLAQ7L513 359 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 KLHL7Q8IXQ5 586 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SLC7A5P1Q8MH63 180 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 CLYBLQ8N0X4 340 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 ZNF619Q8N2I2 560 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 FAM133AQ8N9E0 248 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SUMF1Q8NBK3 374 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SLC4A11Q8NBS3 891 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 HEXDCQ8WVB3 486 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 NELFBQ8WX92 580 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 KRT35Q92764 455 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 TLCD1Q96CP7 247 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 DGCR14Q96DF8 476 aaKnown RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 OTUB1Q96FW1 271 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 CCDC42Q96M95 316 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 AK8Q96MA6 479 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SPATA33Q96N06 139 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 ZNF317Q96PQ6 595 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 CCT7Q99832 543 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms