RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 PTPRBP23467 1997 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 GNGT2O14610 69 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 FCMRO60667 390 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 DKK1O94907 266 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 IGKV3-11P04433 115 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 ALPPP05187 535 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 CYC1P08574 325 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 CSRP1P21291 193 aaKnown RBP20.38■□□□□ 0.85
LINC01960-201ENST00000563759 VLDLRP98155 873 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 DUSP7Q16829 419 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 FRRS1Q6ZNA5 592 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 HMGN2P46Q86SG4 172 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 CHDHQ8NE62 594 aaPredicted RBP20.38■□□□□ 0.85
LINC01960-201ENST00000563759 PROX1Q92786 737 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 SLC46A1Q96NT5 459 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 ZNF350Q9GZX5 532 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 QRSL1Q9H0R6 528 aaKnown RBP20.38■□□□□ 0.85
LINC01960-201ENST00000563759 C19orf25Q9UFG5 118 aaPredicted RBP20.38■□□□□ 0.85
LINC01960-201ENST00000563759 MKLN1Q9UL63 735 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 PCDHGA3Q9Y5H0 932 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 CFAP54Q96N23 3096 aa20.38■□□□□ 0.85
LINC01960-201ENST00000563759 IGHV3-20A0A0C4DH32 117 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 GXYLT2A0PJZ3 443 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 C9orf172C9J069 976 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 BRINP1O60477 761 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 STX11O75558 287 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 CCNYL3P0C7X3 344 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 TNFRSF1BP20333 461 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 RFX3P48380 749 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 FIGNL1Q6PIW4 674 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 C6orf15Q6UXA7 325 aaPredicted RBP20.37■□□□□ 0.85
LINC01960-201ENST00000563759 MORN4Q8NDC4 146 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 KLHL4Q9C0H6 718 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 TRIM45Q9H8W5 580 aaPredicted RBP20.37■□□□□ 0.85
LINC01960-201ENST00000563759 DNAJB9Q9UBS3 223 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 ABCG2Q9UNQ0 655 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 OR10H1Q9Y4A9 318 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 TTC36A6NLP5 189 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 ZIC2O95409 532 aaPredicted RBP20.37■□□□□ 0.85
LINC01960-201ENST00000563759 CD247P20963 164 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 OR1E2P47887 323 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 TYW3Q6IPR3 259 aaKnown RBP20.37■□□□□ 0.85
LINC01960-201ENST00000563759 NPSR1Q6W5P4 371 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 CATSPER1Q8NEC5 780 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 OR1N1Q8NGS0 311 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 CIB1Q99828 191 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 NUDT9Q9BW91 350 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 PADI1Q9ULC6 663 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 PADI2Q9Y2J8 665 aa20.37■□□□□ 0.85
LINC01960-201ENST00000563759 PTRH2Q9Y3E5 179 aaKnown RBP20.37■□□□□ 0.85
LINC01960-201ENST00000563759 CEP250Q9BV73 2442 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 SAC3D1A6NKF1 404 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 KCNK2O95069 426 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 FESP07332 822 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 GPR68Q15743 365 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 GAL3ST4Q96RP7 486 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 MESP1Q9BRJ9 268 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 FOXJ2Q9P0K8 574 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 DTNAQ9Y4J8 743 aa20.36■□□□□ 0.85
LINC01960-201ENST00000563759 SAGE2PA6NJ88 616 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 DLGAP3O95886 979 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 PABPC4LP0CB38 370 aaKnown RBP20.35■□□□□ 0.85
LINC01960-201ENST00000563759 ZNF23P17027 643 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 TRHRP34981 398 aaPredicted RBP20.35■□□□□ 0.85
LINC01960-201ENST00000563759 KCNJ5P48544 419 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 TARDBPQ13148 414 aaKnown RBP eCLIP20.35■□□□□ 0.85
LINC01960-201ENST00000563759 ZNF311Q5JNZ3 666 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 FAM69BQ5VUD6 431 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 ZNF619Q8N2I2 560 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 GPR32P1Q8NGA4 272 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 C7orf34Q96L11 122 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 ZNF354BQ96LW1 612 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 BTBD9Q96Q07 612 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 VCXQ9H320 206 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 OAZ3Q9UMX2 235 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 AHCTF1Q8WYP5 2266 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 CT45A8P0DMV1 189 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 CT45A9P0DMV2 189 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 ATP6V1C1P21283 382 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 CT45A2Q5DJT8 189 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 PAPD4Q6PIY7 484 aaKnown RBP20.35■□□□□ 0.85
LINC01960-201ENST00000563759 TMEM205Q6UW68 189 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 IZUMO2Q6UXV1 221 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 SLC29A4Q7RTT9 530 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 CPEB2Q7Z5Q1 589 aaKnown RBP20.35■□□□□ 0.85
LINC01960-201ENST00000563759 PEX5LQ8IYB4 626 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 OR4N2Q8NGD1 307 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 LPAR4Q99677 370 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 MTHFD2LQ9H903 347 aaPredicted RBP20.35■□□□□ 0.85
LINC01960-201ENST00000563759 POLE3Q9NRF9 147 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 CBLCQ9ULV8 474 aa20.35■□□□□ 0.85
LINC01960-201ENST00000563759 KIAA0513O60268 411 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 DIRAS1O95057 198 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 IFNW1P05000 195 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 FOLR3P41439 243 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 NOVA1P51513 510 aaKnown RBP20.34■□□□□ 0.85
LINC01960-201ENST00000563759 KCNC4Q03721 635 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 HLA-DQA1Q5Y7H0 255 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 PIWIL3Q7Z3Z3 882 aaKnown RBP20.34■□□□□ 0.85
LINC01960-201ENST00000563759 B3GNT7Q8NFL0 401 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms