RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 WHAMMP3Q1A5X7 153 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 CTU2Q2VPK5 515 aaKnown RBP9.27□□□□□ -0.93
SF3B3-204ENST00000563739 HIST2H2AA3Q6FI13 130 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 OR2A2Q6IF42 318 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 FAM214BQ7L5A3 538 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 NUDT13Q86X67 352 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 ARIH2OSQ8N7S6 290 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 ADCY4Q8NFM4 1077 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 KBTBD8Q8NFY9 601 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 OR52R1Q8NGF1 315 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 CNRIP1Q96F85 164 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-204ENST00000563739 BTBD9Q96Q07 612 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 TRAF4Q9BUZ4 470 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-204ENST00000563739 ALG9Q9H6U8 611 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 L2HGDHQ9H9P8 463 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 PLSCR4Q9NRQ2 329 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 NUDT4Q9NZJ9 180 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 CD274Q9NZQ7 290 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 CLEC4AQ9UMR7 237 aa9.27□□□□□ -0.93
SF3B3-204ENST00000563739 SS18L1O75177 396 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-204ENST00000563739 GCM2O75603 506 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-204ENST00000563739 DRD5P21918 477 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 PIK3R1P27986 724 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 PPICP45877 212 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 ATP6V0D1P61421 351 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 POU4F1Q01851 419 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 TSC22D1Q15714 1073 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 ETFDHQ16134 617 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 EXOC3L2Q2M3D2 409 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 TMEM249Q2WGJ8 235 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 ZNF628Q5EBL2 1059 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 NCMAPQ5T1S8 102 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 SLC48A1Q6P1K1 146 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 AAGABQ6PD74 315 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 P4HA3Q7Z4N8 544 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 CMC1Q7Z7K0 106 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 DTX2Q86UW9 622 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 WFDC8Q8IUA0 241 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 CENPLQ8N0S6 344 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-204ENST00000563739 L3MBTL4Q8NA19 623 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 FBXO36Q8NEA4 188 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 OR10H5Q8NGA6 315 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 OR4N2Q8NGD1 307 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 OR4K14Q8NGD5 310 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 UBE2E3Q969T4 207 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 VSTM2LQ96N03 204 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 COL21A1Q96P44 957 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 HBEGFQ99075 208 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 SLC39A3Q9BRY0 314 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 ACTR6Q9GZN1 396 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 TMEM160Q9NX00 188 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 WHRNQ9P202 907 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 DKKL1Q9UK85 242 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 PROCRQ9UNN8 238 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 LIPT1Q9Y234 373 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 RNF11Q9Y3C5 154 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 PCDHA9Q9Y5H5 950 aa9.26□□□□□ -0.93
SF3B3-204ENST00000563739 DYSFO75923 2080 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 SEC14L5O43304 696 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 KCNAB3O43448 404 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 RAD51CO43502 376 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 FADS1O60427 444 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 KERAO60938 352 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 SEMA3DO95025 777 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 PEPDP12955 493 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 PORP16435 677 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-204ENST00000563739 ZNF16P17020 682 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-204ENST00000563739 KRT15P19012 456 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 PSMB1P20618 241 aaKnown RBP9.25□□□□□ -0.93
SF3B3-204ENST00000563739 IL11P20809 199 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 IGFBP5P24593 272 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 IDUAP35475 653 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 FEN1P39748 380 aaKnown RBP9.25□□□□□ -0.93
SF3B3-204ENST00000563739 KCNJ5P48544 419 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 GALNT1Q10472 559 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-204ENST00000563739 C11orf71Q6IPW1 123 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 SCIMPQ6UWF3 145 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 DNAJC14Q6Y2X3 702 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-204ENST00000563739 IL17RELQ6ZVW7 336 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 MILR1Q7Z6M3 343 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 TEX9Q8N6V9 391 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 OR6K3Q8NGY3 331 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 ROBO4Q8WZ75 1007 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 LRRC39Q96DD0 335 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 C11orf24Q96F05 449 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-204ENST00000563739 ADOQ96SZ5 270 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 RBBP8Q99708 897 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 LRRC1Q9BTT6 524 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 MRPL1Q9BYD6 325 aaKnown RBP9.25□□□□□ -0.93
SF3B3-204ENST00000563739 TRIM2Q9C040 744 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 BRINP2Q9C0B6 783 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 DSN1Q9H410 356 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 SAYSD1Q9NPB0 183 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 OPTCQ9UBM4 332 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 NBEAL2Q6ZNJ1 2754 aa9.25□□□□□ -0.93
SF3B3-204ENST00000563739 SLC35F4A4IF30 521 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 DPRXA6NFQ7 191 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 FAM187AA6NFU0 413 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 FOXE1O00358 373 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 OR7A17O14581 309 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms