RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 RPF1Q9H9Y2 349 aaKnown RBP3.31□□□□□ -1.88
LINC01416-201ENST00000563553 PTPRHQ9HD43 1115 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 PXMP2Q9NR77 195 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 ABCB8Q9NUT2 735 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 NDUFB11Q9NX14 153 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 DCAF16Q9NXF7 216 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 DPP3Q9NY33 737 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 SRP68Q9UHB9 627 aaKnown RBP3.31□□□□□ -1.88
LINC01416-201ENST00000563553 MUTYHQ9UIF7 546 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 SCP2D1Q9UJQ7 156 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 IKZF3Q9UKT9 509 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 SSR3Q9UNL2 185 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 TNFSF13BQ9Y275 285 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 FIS1Q9Y3D6 152 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 NEUROG3Q9Y4Z2 214 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 NPTNQ9Y639 398 aa3.31□□□□□ -1.88
LINC01416-201ENST00000563553 COL4A4P53420 1690 aaPredicted RBP3.31□□□□□ -1.88
LINC01416-201ENST00000563553 ZNF236Q9UL36 1845 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 LOC100506127A0A0U1RQW1 187 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FAM240BA0A1B0GVZ2 78 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 A0A1W2PPL8 197 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 INMT-MINDY4F8WBC2 141 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SLC28A1O00337 649 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PER2O15055 1255 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ADAMDEC1O15204 470 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PLA2G10O15496 165 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 LYRM1O43325 122 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PSIP1O75475 530 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MT-ND1P03886 318 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CNPP09543 421 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TSPAN19P0C672 248 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SMIM6P0DI80 62 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SLC2A2P11168 524 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 HSPA7P48741 367 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CCT3P49368 545 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 RAB13P51153 203 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 DGKEP52429 567 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ACLYP53396 1101 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 OAZ1P54368 228 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 UFM1P61960 85 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ABATP80404 500 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ACVR1Q04771 509 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 VEZF1Q14119 521 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 NCF4Q15080 339 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FAM187BQ17R55 369 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FUT11Q495W5 492 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 GPR33Q49SQ1 333 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 KLHL22Q53GT1 634 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 C6orf136Q5SQH8 315 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CELF3Q5SZQ8 465 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 KIAA1324Q6UXG2 1013 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 USP50Q70EL3 339 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 BCDIN3DQ7Z5W3 292 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 DEFB132Q7Z7B7 95 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TMEM179BQ7Z7N9 219 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FBXO39Q8N4B4 442 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 NKAPQ8N5F7 415 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ZNF557Q8N988 423 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ATG16L2Q8NAA4 619 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SLC37A3Q8NCC5 494 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ZBTB44Q8NCP5 570 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 OR2T11Q8NH01 316 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FBXO30Q8TB52 745 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TMEM163Q8TC26 289 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MTERF3Q96E29 417 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ZBTB45Q96K62 511 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ATOH8Q96SQ7 321 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TMEM43Q9BTV4 400 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MND1Q9BWT6 205 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 DPH1Q9BZG8 443 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MED28Q9H204 178 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MMP28Q9H239 520 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PPIL3Q9H2H8 161 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FZD3Q9NPG1 666 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 RASSF1Q9NS23 344 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ABCC13Q9NSE7 274 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PPP1R14DQ9NXH3 145 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SIX4Q9UIU6 781 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 COPS3Q9UNS2 423 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CORO2BQ9UQ03 480 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 NCKAP1Q9Y2A7 1128 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PADI2Q9Y2J8 665 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 NUBP2Q9Y5Y2 271 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 COMMD10Q9Y6G5 202 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CDH10Q9Y6N8 788 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 U3KQV3 271 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 LOC285556D6RIA3 1793 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ZSWIM8A7E2V4 1837 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 WDR81Q562E7 1941 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ANK1P16157 1881 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ZFC3H1O60293 1989 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MEIKINA0A087WXM9 373 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 A0A087WZ62 844 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 NEMP2A6NFY4 417 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 AIPO00170 330 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 AKR7A2O43488 359 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SMAD6O43541 496 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CHP2O43745 196 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PRAF2O60831 178 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ATP6AP2O75787 350 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms