RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ADRA2AP08913 450 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 NXPH1P58417 271 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 OCA2Q04671 838 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 BNIP3Q12983 259 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 SLX4IPQ5VYV7 408 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 ZNF836Q6ZNA1 936 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 Q7L0L9 218 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 IQCF1Q8N6M8 205 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 GAB3Q8WWW8 586 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 DIO2Q92813 273 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 IL4I1Q96RQ9 567 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 PIGUQ9H490 435 aa17.83■□□□□ 0.45
SMPD3-203ENST00000563226 SDK1Q7Z5N4 2213 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 A0A087WUU8 490 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 A0A087WV62 115 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 A0A1B0GVG6 124 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 LILRA5A6NI73 299 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 TGFBR3LH3BV60 316 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 AGR2O95994 175 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 TNNI3P19429 210 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 CSNK1EP49674 416 aaKnown RBP17.83■□□□□ 0.44
SMPD3-203ENST00000563226 RNF144AP50876 292 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-203ENST00000563226 MAT1AQ00266 395 aaKnown RBP17.83■□□□□ 0.44
SMPD3-203ENST00000563226 DUSP8Q13202 625 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 GPR68Q15743 365 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 MAPK14Q16539 360 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 KLHL35Q6PF15 583 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 C17orf82Q86X59 251 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-203ENST00000563226 B3GNT7Q8NFL0 401 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 TGM7Q96PF1 710 aa17.83■□□□□ 0.44
SMPD3-203ENST00000563226 CDX2Q99626 313 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-203ENST00000563226 NPIPA5A0A0B4J1W7 369 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 NPIPA7E9PJI5 369 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 THY1P04216 161 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 NPIPA8P0DM63 369 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 PPM1FP49593 454 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-203ENST00000563226 SYT16Q17RD7 645 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 DCST2Q5T1A1 773 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 UBE2UQ5VVX9 321 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 C12orf73Q69YU5 71 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 ZNF675Q8TD23 568 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 MYDGFQ969H8 173 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 ZNF350Q9GZX5 532 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 PCED1AQ9H1Q7 454 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 OCEL1Q9H607 264 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 MTHFD2LQ9H903 347 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-203ENST00000563226 UCK1Q9HA47 277 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 TBC1D17Q9HA65 648 aa17.82■□□□□ 0.44
SMPD3-203ENST00000563226 CDC123O75794 336 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-203ENST00000563226 CYP7B1O75881 506 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 GABARAPO95166 117 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 CBX7O95931 251 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 ALOX5P09917 674 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 GABRA4P48169 554 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 RGS8P57771 180 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-203ENST00000563226 ENTPD8Q5MY95 495 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 NKAIN2Q5VXU1 208 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 C1orf94Q6P1W5 598 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 SPEM1Q8N4L4 309 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 TBC1D15Q8TC07 691 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 CTHRC1Q96CG8 243 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 TCTN2Q96GX1 697 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 PEX11GQ96HA9 241 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 SHDQ96IW2 340 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 TAS2R16Q9NYV7 291 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 NDOR1Q9UHB4 597 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 KCNE5Q9UJ90 142 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMPD3-203ENST00000563226 IGHV5-51A0A0C4DH38 117 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 GXYLT2A0PJZ3 443 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 OR2W5A6NFC9 320 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 CCNYL3P0C7X3 344 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 ALDH4A1P30038 563 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 TGFBR2P37173 567 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 LSM3P62310 102 aaKnown RBP17.81■□□□□ 0.44
SMPD3-203ENST00000563226 ST3GAL4Q11206 333 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 ERV3-1Q14264 604 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 KIF18BQ86Y91 864 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 NKAIN4Q8IVV8 208 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 PEX5LQ8IYB4 626 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 GJD3Q8N144 294 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 METTL27Q8N6F8 245 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-203ENST00000563226 CDRT4Q8N9R6 151 aa17.81■□□□□ 0.44
SMPD3-203ENST00000563226 SPEGQ15772 3267 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 LMO7DNF2Z398 122 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 STK25O00506 426 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 PEX12O00623 359 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 ENTPD6O75354 484 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 BCL10O95999 233 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 MAP3K8P41279 467 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 ST13P50502 369 aaKnown RBP17.8■□□□□ 0.44
SMPD3-203ENST00000563226 MLLT10P55197 1068 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 EEF1A1P68104 462 aaKnown RBP17.8■□□□□ 0.44
SMPD3-203ENST00000563226 DMWDQ09019 674 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 TBCEQ15813 527 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-203ENST00000563226 FIGNL1Q6PIW4 674 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 CD300LDQ6UXZ3 194 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 PRICKLE2Q7Z3G6 844 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 BCDIN3DQ7Z5W3 292 aaKnown RBP17.8■□□□□ 0.44
SMPD3-203ENST00000563226 STX19Q8N4C7 294 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms