RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PCDHGB4Q9UN71 923 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 ERVK-11Q9UQG0 969 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 PKDREJQ9NTG1 2253 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 ZNF407Q9C0G0 2248 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 C2orf92A0A1B0GVN3 265 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 FAM234BA2RU67 622 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 TTC36A6NLP5 189 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 ENO4A6NNW6 628 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 SOX30O94993 753 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 CLDN14O95500 239 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 PGRP06401 933 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 TPOP07202 933 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 COX6B1P14854 86 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 NCF2P19878 526 aaPredicted RBP14.4□□□□□ -0.1
USB1-208ENST00000563207 POU3F2P20265 443 aaPredicted RBP14.4□□□□□ -0.1
USB1-208ENST00000563207 GPX3P22352 226 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 PTGS2P35354 604 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 SMSP52788 366 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 GYS2P54840 703 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 NME5P56597 212 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 MRPS35P82673 323 aaKnown RBP14.4□□□□□ -0.1
USB1-208ENST00000563207 PRR5P85299 388 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 HSPB3Q12988 150 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 SPANXN4Q5MJ08 99 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 OR4F3Q6IEY1 312 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 BHLHB9Q6PI77 547 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 TMEM107Q6UX40 140 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 TMEM64Q6YI46 380 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 MSANTD1Q6ZTZ1 278 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 CPLX4Q7Z7G2 160 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 GPALPP1Q8IXQ4 340 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 DND1Q8IYX4 353 aaKnown RBP14.4□□□□□ -0.1
USB1-208ENST00000563207 OR2M7Q8NG81 312 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 OR7G2Q8NG99 324 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 OR52R1Q8NGF1 315 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 FAM57AQ8TBR7 257 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 ASB15Q8WXK1 588 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 MOAP1Q96BY2 351 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 SDCCAG3Q96C92 435 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 TEX37Q96LM6 180 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 WWTR1Q9GZV5 400 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 DDX18Q9NVP1 670 aaKnown RBP14.4□□□□□ -0.1
USB1-208ENST00000563207 BTNL2Q9UIR0 455 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 LIPGQ9Y5X9 500 aa14.4□□□□□ -0.1
USB1-208ENST00000563207 AKAP9Q99996 3911 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 A8MVJ9 347 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 E9PLN8 166 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 UPK1AO00322 258 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 PRRG2O14669 202 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 EMC8O43402 210 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 SCN2BO60939 215 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 CELA3AP09093 270 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 IL12AP29459 219 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 MC3RP41968 323 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 PPICP45877 212 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 DNASE1L1P49184 302 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 EMDP50402 254 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 POLR2JP52435 117 aaKnown RBP14.39□□□□□ -0.11
USB1-208ENST00000563207 WNT3P56703 355 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 EXOSC7Q15024 291 aaKnown RBP14.39□□□□□ -0.11
USB1-208ENST00000563207 PIGGQ5H8A4 983 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 ZCCHC12Q6PEW1 402 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 TAGAPQ8N103 731 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 POGLUT1Q8NBL1 392 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 SLC22A8Q8TCC7 542 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 ADIPOR1Q96A54 375 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 MARK4Q96L34 752 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 OR52E6Q96RD3 313 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 VKORC1Q9BQB6 163 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 CHST11Q9NPF2 352 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 TIMMDC1Q9NPL8 285 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 PLSCR2Q9NRY7 297 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 HPF1Q9NWY4 346 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 CELSR1Q9NYQ6 3014 aa14.39□□□□□ -0.11
USB1-208ENST00000563207 HCFC1P51610 2035 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 CAPN14A8MX76 684 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 ACOX3O15254 700 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 CFLARO15519 480 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 PSMG1O95456 288 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 CCL3P10147 92 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 AGAP20933 346 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 DRD5P21918 477 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 ADSLP30566 484 aaPredicted RBP14.38□□□□□ -0.11
USB1-208ENST00000563207 SEC24CP53992 1094 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 NRG3P56975 720 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 PPIAP62937 165 aaKnown RBP14.38□□□□□ -0.11
USB1-208ENST00000563207 HBA1P69905 142 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 RCAN2Q14206 197 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 PAOXQ6QHF9 649 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 OPN5Q6U736 354 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 TRIML2Q8N7C3 387 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 ZNF441Q8N8Z8 693 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 GOT1L1Q8NHS2 421 aaPredicted RBP14.38□□□□□ -0.11
USB1-208ENST00000563207 SFXN5Q8TD22 340 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 TSPEARQ8WU66 669 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 C10orf82Q8WW14 230 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 HSPBAP1Q96EW2 488 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 LCORQ96JN0 433 aaPredicted RBP14.38□□□□□ -0.11
USB1-208ENST00000563207 LURAP1Q96LR2 239 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 CCDC115Q96NT0 180 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms