RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 FBLL1A6NHQ2 334 aaKnown RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 CCDC69A6NI79 296 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 SLC9B1P1A6NJY1 282 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 TRIM49D1C9J1S8 452 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 H3BTX0 84 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 WWP2O00308 870 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 SSX5O60225 188 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 LRP3O75074 770 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 IGLV1-47P01700 117 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 CXCL10P02778 98 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 HSPB1P04792 205 aaKnown RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 PGK2P07205 417 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 ALPIP09923 528 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 RALAP11233 206 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 H2AFXP16104 143 aaPredicted RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 ACVR1BP36896 505 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 POU3F4P49335 361 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 STX17P56962 302 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 RIPK4P57078 832 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 MYBPC1Q00872 1141 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 OC90Q02509 493 aaPredicted RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 SRYQ05066 204 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 KYAT1Q16773 422 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 ZSWIM7Q19AV6 140 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 BEND6Q5SZJ8 279 aaPredicted RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 OTPQ5XKR4 325 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 FAM159AQ6UWV7 190 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 PAQR9Q6ZVX9 377 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 NET1Q7Z628 596 aaPredicted RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 AMZ2Q86W34 360 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 C9orf40Q8IXQ3 194 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 TMEM185AQ8NFB2 350 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 WDR36Q8NI36 951 aaKnown RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 EXOC6Q8TAG9 804 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 FRAT1Q92837 279 aaPredicted RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 DTD2Q96FN9 168 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 CABS1Q96KC9 395 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 IMMP1LQ96LU5 166 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 ABCG8Q9H221 673 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 CARD9Q9H257 536 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 DUS2Q9NX74 493 aaKnown RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 GHRLQ9UBU3 117 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 PRO0461Q9UI25 63 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 APPL1Q9UKG1 709 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 ABCG2Q9UNQ0 655 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 RPH3AQ9Y2J0 694 aaPredicted RBP2.05□□□□□ -2.08
CHD9-207ENST00000562806 KLHDC2Q9Y2U9 406 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 ZMYM6O95789 1325 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 NPC1L1Q9UHC9 1359 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 ARHGAP23Q9P227 1491 aa2.05□□□□□ -2.08
CHD9-207ENST00000562806 WI2-2373I1.2A0A1W2PRP0 233 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ARHGAP42A6NI28 874 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 E9PMD0 336 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 SGK494L7N484 410 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 OR7A17O14581 309 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 STAM2O75886 525 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 CABYRO75952 493 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 CXCL14O95715 111 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ACTL6AO96019 429 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 PRG2P13727 222 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ELK1P19419 428 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 IDSP22304 550 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 HOXD10P28358 340 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 RPL4P36578 427 aaKnown RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 HLCSP50747 726 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 SRP54P61011 504 aaKnown RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 UBXN1Q04323 297 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ACTN3Q08043 901 aaPredicted RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 CBX3Q13185 183 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ORC2Q13416 577 aaPredicted RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 SNX1Q13596 522 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ZNF699Q32M78 642 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ZNF528Q3MIS6 628 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 LRIT3Q3SXY7 679 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 EOGTQ5NDL2 527 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 OR5M10Q6IEU7 315 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 TAF8Q7Z7C8 310 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 PARGQ86W56 976 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 CNTN4Q8IWV2 1026 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 SLC34A3Q8N130 599 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ZNF397Q8NF99 534 aaPredicted RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 OR4F17Q8NGA8 305 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 IL1F10Q8WWZ1 152 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 KRT35Q92764 455 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 ELSPBP1Q96BH3 223 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 PINX1Q96BK5 328 aaKnown RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 TADA1Q96BN2 335 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 C16orf74Q96GX8 76 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 LINC00167Q96N53 147 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 OR4F4Q96R69 305 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 SDHCQ99643 169 aaPredicted RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 FAM114A2Q9NRY5 505 aa2.04□□□□□ -2.08
CHD9-207ENST00000562806 EXOSC1Q9Y3B2 195 aaKnown RBP2.04□□□□□ -2.08
CHD9-207ENST00000562806 SPAG9O60271 1321 aaKnown RBP2.03□□□□□ -2.08
CHD9-207ENST00000562806 SYCE3A1L190 88 aa2.03□□□□□ -2.08
CHD9-207ENST00000562806 DHRS7CA6NNS2 312 aa2.03□□□□□ -2.08
CHD9-207ENST00000562806 HTATSF1O43719 755 aaKnown RBP2.03□□□□□ -2.08
CHD9-207ENST00000562806 KERAO60938 352 aa2.03□□□□□ -2.08
CHD9-207ENST00000562806 SDC3O75056 442 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms