RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TSNQ15631 228 aaKnown RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 SLC5A12Q1EHB4 618 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 AMZ1Q400G9 498 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 TECRLQ5HYJ1 363 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 TYW3Q6IPR3 259 aaKnown RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 LRRC8EQ6NSJ5 796 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 SPESP1Q6UW49 350 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 CDHR3Q6ZTQ4 885 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 FAM92BQ6ZTR7 304 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 GALNT15Q8N3T1 639 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 NKAPQ8N5F7 415 aaKnown RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 PPFIBP2Q8ND30 876 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 MYRIPQ8NFW9 859 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 OR9A1PQ8NGU1 263 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 OR10G6Q8NH81 332 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 CFAP61Q8NHU2 1237 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 KCTD4Q8WVF5 259 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 UBLCP1Q8WVY7 318 aaPredicted RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 LCN9Q8WX39 176 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 NCSTNQ92542 709 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 FBXL8Q96CD0 374 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 NXNL1Q96CM4 212 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 TGM7Q96PF1 710 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 TRAPPC9Q96Q05 1148 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 OR4K3Q96R72 315 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 NODALQ96S42 347 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 MAP3K3Q99759 626 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 CHRNA10Q9GZZ6 450 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 SRMSQ9H3Y6 488 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 STN1Q9H668 368 aaKnown RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 CLK4Q9HAZ1 481 aaKnown RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 PARVBQ9HBI1 364 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 SYTL2Q9HCH5 934 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 FAM60AQ9NP50 221 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 ASCL3Q9NQ33 180 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 OR6C2Q9NZP2 312 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 STOX2Q9P2F5 926 aaPredicted RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 LGALS13Q9UHV8 139 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 KCND3Q9UK17 655 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 PILRAQ9UKJ1 303 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 EMCNQ9ULC0 261 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 BTRCQ9Y297 605 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 TDRKHQ9Y2W6 561 aaKnown RBP4.28□□□□□ -1.72
SMG1-206ENST00000562668 OARD1Q9Y530 152 aa4.28□□□□□ -1.72
SMG1-206ENST00000562668 PCM1Q15154 2024 aa4.28□□□□□ -1.73
SMG1-206ENST00000562668 SDK2Q58EX2 2172 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 NCOR2Q9Y618 2525 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 FER1L5A0AVI2 2057 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 ANKRD12Q6UB98 2062 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 HEATR5BQ9P2D3 2071 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 OR2A25A4D2G3 310 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 TRABD2BA6NFA1 517 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 TLCD2A6NGC4 264 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 SLC9B1P1A6NJY1 282 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 CDRT15L2A8MXV6 281 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 C2orf74A8MZ97 194 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 B4E171 279 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 BMPR1BO00238 502 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 TAF4O00268 1085 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 KERAO60938 352 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 IGLV2-11P01706 119 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 CATP04040 527 aaKnown RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 RPN2P04844 631 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 TUBBP07437 444 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 INHBAP08476 426 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 SNRPAP09012 282 aaKnown RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 PVRP15151 417 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 FOLR1P15328 257 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 AMD1P17707 334 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 NELFEP18615 380 aaKnown RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 ITIH1P19827 911 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 TSPAN7P41732 249 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 MAPK9P45984 424 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 RGS4P49798 205 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 SERPINB8P50452 374 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 AP1S2P56377 157 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 ATP6V0D1P61421 351 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 TBPL1P62380 186 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 ADORA2A-AS1P86434 159 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 SLC18A2Q05940 514 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 MYBPHQ13203 477 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 KIR2DS3Q14952 304 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 SF3B4Q15427 424 aaKnown RBP eCLIP4.27□□□□□ -1.738e-7■■□□□ 12.3
SMG1-206ENST00000562668 TGFBIQ15582 683 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 C18orf21Q32NC0 220 aaPredicted RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 RUNDC3AQ59EK9 446 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 CDKL4Q5MAI5 379 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 AGTRAPQ6RW13 159 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 SUSD1Q6UWL2 747 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 CCDC91Q7Z6B0 441 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 PAQR7Q86WK9 346 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 OOSP2Q86WS3 158 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 DNAJC22Q8N4W6 341 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 C2orf73Q8N5S3 287 aaPredicted RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 ATG16L2Q8NAA4 619 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 OR2L3Q8NG85 312 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 OR4K1Q8NGD4 311 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 WDR36Q8NI36 951 aaKnown RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 RHEBL1Q8TAI7 183 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 UBTD2Q8WUN7 234 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms