RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ZNHIT3Q15649 155 aaPredicted RBP12.32□□□□□ -0.44
CDH1-204ENST00000562118 NNATQ16517 81 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 TIGD2Q4W5G0 525 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 COLEC12Q5KU26 742 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 RNFT1Q5M7Z0 435 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 FNDC7Q5VTL7 733 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 SLC22A10Q63ZE4 541 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 HEPHL1Q6MZM0 1159 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 BNC2Q6ZN30 1099 aaPredicted RBP12.32□□□□□ -0.44
CDH1-204ENST00000562118 SLC44A2Q8IWA5 706 aaPredicted RBP12.32□□□□□ -0.44
CDH1-204ENST00000562118 BCORP1Q8N888 145 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 CHDHQ8NE62 594 aaPredicted RBP12.32□□□□□ -0.44
CDH1-204ENST00000562118 OR2M7Q8NG81 312 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 OR4A15Q8NGL6 344 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 CPT1CQ8TCG5 803 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 FAR1Q8WVX9 515 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 NR4A3Q92570 626 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 C16orf58Q96GQ5 468 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 COL21A1Q96P44 957 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 FAM173AQ9BQD7 235 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 INPP5KQ9BT40 448 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 PAIP1Q9H074 479 aaKnown RBP12.32□□□□□ -0.44
CDH1-204ENST00000562118 Q9N2J8 555 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 SAR1AQ9NR31 198 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 SLC6A13Q9NSD5 602 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 SACM1LQ9NTJ5 587 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 LUZP4Q9P127 313 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 NINQ8N4C6 2090 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 MYO18BQ8IUG5 2567 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 A0A1W2PP18 115 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 PINLYPA6NC86 204 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 EIF4E1BA6NMX2 242 aaKnown RBP12.31□□□□□ -0.44
CDH1-204ENST00000562118 KLRC4-KLRK1H3BQV0 150 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 TP53I11O14683 189 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 SLC22A2O15244 555 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 CFLARO15519 480 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 PEX1O43933 1283 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 SHOX2O60902 331 aaPredicted RBP12.31□□□□□ -0.44
CDH1-204ENST00000562118 KCNK2O95069 426 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 IGKV1D-16P01601 117 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 GYS2P54840 703 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 MLLT10P55197 1068 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 MRPS22P82650 360 aaKnown RBP12.31□□□□□ -0.44
CDH1-204ENST00000562118 TLE1Q04724 770 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 EFR3AQ14156 821 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 C6orf120Q7Z4R8 191 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 WDR53Q7Z5U6 358 aaPredicted RBP12.31□□□□□ -0.44
CDH1-204ENST00000562118 PRR22Q8IZ63 422 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 DPP10Q8N608 796 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 GRHL3Q8TE85 626 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 ZFP90Q8TF47 636 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 VPS33AQ96AX1 596 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 SPDL1Q96EA4 605 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 TMEM41AQ96HV5 264 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 MAGED4Q96JG8 741 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 NODALQ96S42 347 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 BTBD2Q9BX70 525 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 UBQLN3Q9H347 655 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 ZDHHC11Q9H8X9 412 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 KLHL1Q9NR64 748 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 ASF1BQ9NVP2 202 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 CCDC167Q9P0B6 97 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 ABCG2Q9UNQ0 655 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 SNX8Q9Y5X2 465 aa12.31□□□□□ -0.44
CDH1-204ENST00000562118 A0A096LPI6 279 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 GXYLT2A0PJZ3 443 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 CCDC154A6NI56 674 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 TTLL8A6PVC2 850 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 B4DXG7 233 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 NPIPB9F8W1W9 429 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 FADS1O60427 444 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 SNX3O60493 162 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 SNX4O95219 450 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 CRYABP02511 175 aaKnown RBP12.3□□□□□ -0.44
CDH1-204ENST00000562118 C1QCP02747 245 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 P04436 131 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 ALOX5P09917 674 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 PLA2G2AP14555 144 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 MST1P26927 711 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 GABRA3P34903 492 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 MEOX1P50221 254 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 SEC24CP53992 1094 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 RPP38P78345 283 aaKnown RBP12.3□□□□□ -0.44
CDH1-204ENST00000562118 PMP22Q01453 160 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 TP53BP2Q13625 1128 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 DECR1Q16698 335 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 COQ5Q5HYK3 327 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 DESI1Q6ICB0 168 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 FAM180AQ6UWF9 173 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 GK5Q6ZS86 529 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.3□□□□□ -0.44
CDH1-204ENST00000562118 CHERPQ8IWX8 916 aaKnown RBP12.3□□□□□ -0.44
CDH1-204ENST00000562118 MSRB3Q8IXL7 192 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 CISD2Q8N5K1 135 aaKnown RBP12.3□□□□□ -0.44
CDH1-204ENST00000562118 TRIML2Q8N7C3 387 aa12.3□□□□□ -0.44
CDH1-204ENST00000562118 FAM98AQ8NCA5 519 aaKnown RBP12.3□□□□□ -0.44
CDH1-204ENST00000562118 GALNT11Q8NCW6 608 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms