RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TTLL10Q6ZVT0 673 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 MED25Q71SY5 747 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 PIWIL3Q7Z3Z3 882 aaKnown RBP7.01□□□□□ -1.29
TPM1-231ENST00000561395 GPR135Q8IZ08 494 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 GALNT4Q8N4A0 578 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 CBR4Q8N4T8 237 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 METTL27Q8N6F8 245 aaPredicted RBP7.01□□□□□ -1.29
TPM1-231ENST00000561395 OR51Q1Q8NH59 317 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 BBS10Q8TAM1 723 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 OTUB1Q96FW1 271 aaPredicted RBP7.01□□□□□ -1.29
TPM1-231ENST00000561395 C16orf58Q96GQ5 468 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 LIN37Q96GY3 246 aaPredicted RBP7.01□□□□□ -1.29
TPM1-231ENST00000561395 TPD52L3Q96J77 140 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 C7orf34Q96L11 122 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 ZNF597Q96LX8 424 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 CCDC74BQ96LY2 380 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 OR7D2Q96RA2 312 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 GFM1Q96RP9 751 aaKnown RBP7.01□□□□□ -1.29
TPM1-231ENST00000561395 SLC29A1Q99808 456 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 YIPF4Q9BSR8 244 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 NDC1Q9BTX1 674 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 ACTRT3Q9BYD9 372 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 SLC25A18Q9H1K4 315 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 ANKRA2Q9H9E1 313 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 PRTFDC1Q9NRG1 225 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 FGF21Q9NSA1 209 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 VNN3Q9NY84 501 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 MAT2BQ9NZL9 334 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 SERTAD3Q9UJW9 196 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 ABCG2Q9UNQ0 655 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 C19orf53Q9UNZ5 99 aaPredicted RBP7.01□□□□□ -1.29
TPM1-231ENST00000561395 PADI2Q9Y2J8 665 aa7.01□□□□□ -1.29
TPM1-231ENST00000561395 FER1L5A0AVI2 2057 aa7□□□□□ -1.29
TPM1-231ENST00000561395 SPENQ96T58 3664 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 MYOCOSA0A1B0GUC4 107 aa7□□□□□ -1.29
TPM1-231ENST00000561395 A0A1B0GX78 115 aa7□□□□□ -1.29
TPM1-231ENST00000561395 C7orf72A4D263 438 aa7□□□□□ -1.29
TPM1-231ENST00000561395 D6RAR5 112 aa7□□□□□ -1.29
TPM1-231ENST00000561395 hCG_2039718K7EN88 272 aa7□□□□□ -1.29
TPM1-231ENST00000561395 PDLIM1O00151 329 aa7□□□□□ -1.29
TPM1-231ENST00000561395 NTN3O00634 580 aaPredicted RBP7□□□□□ -1.29
TPM1-231ENST00000561395 CLDN4O14493 209 aa7□□□□□ -1.29
TPM1-231ENST00000561395 EI24O14681 340 aa7□□□□□ -1.29
TPM1-231ENST00000561395 OR10H2O60403 315 aa7□□□□□ -1.29
TPM1-231ENST00000561395 DPM1O60762 260 aa7□□□□□ -1.29
TPM1-231ENST00000561395 CDC123O75794 336 aaPredicted RBP7□□□□□ -1.29
TPM1-231ENST00000561395 MFN2O95140 757 aa7□□□□□ -1.29
TPM1-231ENST00000561395 TNFSF15O95150 251 aa7□□□□□ -1.29
TPM1-231ENST00000561395 RECKO95980 971 aa7□□□□□ -1.29
TPM1-231ENST00000561395 AGR2O95994 175 aa7□□□□□ -1.29
TPM1-231ENST00000561395 CT62P0C5K7 136 aa7□□□□□ -1.29
TPM1-231ENST00000561395 UQCRBP14927 111 aa7□□□□□ -1.29
TPM1-231ENST00000561395 ZNF23P17027 643 aa7□□□□□ -1.29
TPM1-231ENST00000561395 FBLP22087 321 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 XCR1P46094 333 aa7□□□□□ -1.29
TPM1-231ENST00000561395 STT3AP46977 705 aa7□□□□□ -1.29
TPM1-231ENST00000561395 CRISP3P54108 245 aa7□□□□□ -1.29
TPM1-231ENST00000561395 HSD17B7P56937 341 aa7□□□□□ -1.29
TPM1-231ENST00000561395 ACY1Q03154 408 aa7□□□□□ -1.29
TPM1-231ENST00000561395 STX4Q12846 297 aa7□□□□□ -1.29
TPM1-231ENST00000561395 MAP4K2Q12851 820 aa7□□□□□ -1.29
TPM1-231ENST00000561395 SLC13A2Q13183 592 aa7□□□□□ -1.29
TPM1-231ENST00000561395 EIF3IQ13347 325 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 ERV3-1Q14264 604 aa7□□□□□ -1.29
TPM1-231ENST00000561395 NRF1Q16656 503 aa7□□□□□ -1.29
TPM1-231ENST00000561395 IQCCQ4KMZ1 466 aa7□□□□□ -1.29
TPM1-231ENST00000561395 IFI44LQ53G44 452 aa7□□□□□ -1.29
TPM1-231ENST00000561395 HEPHL1Q6MZM0 1159 aa7□□□□□ -1.29
TPM1-231ENST00000561395 RBM44Q6ZP01 1051 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 ARMC8Q8IUR7 673 aa7□□□□□ -1.29
TPM1-231ENST00000561395 SLITRK4Q8IW52 837 aa7□□□□□ -1.29
TPM1-231ENST00000561395 SLC44A2Q8IWA5 706 aaPredicted RBP7□□□□□ -1.29
TPM1-231ENST00000561395 ST13P4Q8IZP2 240 aaPredicted RBP7□□□□□ -1.29
TPM1-231ENST00000561395 VWA5B2Q8N398 1253 aa7□□□□□ -1.29
TPM1-231ENST00000561395 SVOPLQ8N434 492 aa7□□□□□ -1.29
TPM1-231ENST00000561395 RCBTB1Q8NDN9 531 aa7□□□□□ -1.29
TPM1-231ENST00000561395 SIMC1Q8NDZ2 872 aa7□□□□□ -1.29
TPM1-231ENST00000561395 OR5K1Q8NHB7 308 aa7□□□□□ -1.29
TPM1-231ENST00000561395 WDR36Q8NI36 951 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 ZDHHC19Q8WVZ1 309 aaPredicted RBP7□□□□□ -1.29
TPM1-231ENST00000561395 XAGE5Q8WWM1 108 aa7□□□□□ -1.29
TPM1-231ENST00000561395 GEMIN6Q8WXD5 167 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 LZICQ8WZA0 190 aa7□□□□□ -1.29
TPM1-231ENST00000561395 TMBIM1Q969X1 311 aa7□□□□□ -1.29
TPM1-231ENST00000561395 CTHRC1Q96CG8 243 aa7□□□□□ -1.29
TPM1-231ENST00000561395 TRNT1Q96Q11 434 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 OR1F2PQ96R84 312 aa7□□□□□ -1.29
TPM1-231ENST00000561395 ZNF607Q96SK3 696 aa7□□□□□ -1.29
TPM1-231ENST00000561395 TREX2Q9BQ50 279 aaPredicted RBP7□□□□□ -1.29
TPM1-231ENST00000561395 BTBD2Q9BX70 525 aa7□□□□□ -1.29
TPM1-231ENST00000561395 RUBCNLQ9H714 662 aa7□□□□□ -1.29
TPM1-231ENST00000561395 SYNDIG1Q9H7V2 258 aa7□□□□□ -1.29
TPM1-231ENST00000561395 CXorf21Q9HAI6 301 aa7□□□□□ -1.29
TPM1-231ENST00000561395 BCL2L10Q9HD36 194 aa7□□□□□ -1.29
TPM1-231ENST00000561395 LANCL2Q9NS86 450 aa7□□□□□ -1.29
TPM1-231ENST00000561395 SIDT1Q9NXL6 827 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 GIN1Q9NXP7 522 aa7□□□□□ -1.29
TPM1-231ENST00000561395 DHCR7Q9UBM7 475 aaKnown RBP7□□□□□ -1.29
TPM1-231ENST00000561395 PLEKHB1Q9UF11 243 aaPredicted RBP7□□□□□ -1.29
TPM1-231ENST00000561395 NDOR1Q9UHB4 597 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms