RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 DPM1O60762 260 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 PPM1BO75688 479 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 KRT16P08779 473 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 FBXO45P0C2W1 286 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 OR12D1P0DN82 309 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 NAGAP17050 411 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 PRDX6P30041 224 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 PIGAP37287 484 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 CASRP41180 1078 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 MVDP53602 400 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 PNLIPRP2P54317 469 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 FBXW4P57775 412 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 POU6F2P78424 691 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-221ENST00000561276 RGNQ15493 299 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 OR1C1Q15619 314 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 DECR1Q16698 335 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 LACTB2Q53H82 288 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-221ENST00000561276 COX20Q5RI15 118 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.47□□□□□ -0.89
LRRC28-221ENST00000561276 REP15Q6BDI9 236 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 DESI1Q6ICB0 168 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 NANOGP8Q6NSW7 305 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 NUP54Q7Z3B4 507 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 DHDDSQ86SQ9 333 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 HPS6Q86YV9 775 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 SLC34A3Q8N130 599 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 CYP4Z2PQ8N1L4 340 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 HORMAD2Q8N7B1 307 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 BCORP1Q8N888 145 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 FAM110BQ8TC76 370 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 XAGE5Q8WWM1 108 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 RAB8BQ92930 207 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 TMBIM1Q969X1 311 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 LRRC58Q96CX6 371 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 RCN3Q96D15 328 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 SPACA9Q96E40 222 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-221ENST00000561276 OMA1Q96E52 524 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 ANKRD27Q96NW4 1050 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 CGREF1Q99674 301 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 BTBD2Q9BX70 525 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.47□□□□□ -0.89
LRRC28-221ENST00000561276 SLC25A18Q9H1K4 315 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 NANOGQ9H9S0 305 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 ARL8BQ9NVJ2 186 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 FBXO34Q9NWN3 711 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 GID8Q9NWU2 228 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 HPF1Q9NWY4 346 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-221ENST00000561276 MRTO4Q9UKD2 239 aaKnown RBP9.47□□□□□ -0.89
LRRC28-221ENST00000561276 ATMQ13315 3056 aa9.47□□□□□ -0.89
LRRC28-221ENST00000561276 ITPR1Q14643 2758 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 EVPLLA8MZ36 301 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 HMGN4O00479 90 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 TSPAN2O60636 221 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 NEURL1O76050 574 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 KCNK2O95069 426 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 IL33O95760 270 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 ETFAP13804 333 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 GPX2P18283 190 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 PPIBP23284 216 aaKnown RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 IL12BP29460 328 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 KRT20P35900 424 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 CRATP43155 626 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 RFX3P48380 749 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 TMED10P49755 219 aaKnown RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 TNFSF10P50591 281 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 PSPHP78330 225 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 MRPS22P82650 360 aaKnown RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 PLCXD2Q0VAA5 305 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 ART3Q13508 389 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 CAPRIN1Q14444 709 aaKnown RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 NTRK2Q16620 822 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 TRMT5Q32P41 509 aaKnown RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 ARHGAP11BQ3KRB8 267 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 PLEKHN1Q494U1 663 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 SLC22A10Q63ZE4 541 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 FAM91A1Q658Y4 838 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 TNFAIP8L2Q6P589 184 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 FIGNL1Q6PIW4 674 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 MDGA2Q7Z553 956 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 GALNT10Q86SR1 603 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 GPALPP1Q8IXQ4 340 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 DND1Q8IYX4 353 aaKnown RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 RBMXL3Q8N7X1 1067 aaKnown RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 COX18Q8N8Q8 333 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 FAM13CQ8NE31 585 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 OR52N2Q8NGI0 321 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 DIO2Q92813 273 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 EFHD2Q96C19 240 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 RMND5BQ96G75 393 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 SGCZQ96LD1 299 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 UBL7Q96S82 380 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 ADOQ96SZ5 270 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 SLC39A3Q9BRY0 314 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 THUMPD3Q9BV44 507 aaKnown RBP9.46□□□□□ -0.9
LRRC28-221ENST00000561276 TRIM8Q9BZR9 551 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 RAD21L1Q9H4I0 556 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 EXD2Q9NVH0 621 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 GMEB1Q9Y692 573 aa9.46□□□□□ -0.9
LRRC28-221ENST00000561276 OR6C70A6NIJ9 312 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms