RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MECRQ9BV79 373 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 OSBPL11Q9BXB4 747 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 METTL7AQ9H8H3 244 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 KCNJ16Q9NPI9 418 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 MRTO4Q9UKD2 239 aaKnown RBP14.57□□□□□ -0.08
LMX1B-204ENST00000561065 GPR55Q9Y2T6 319 aaPredicted RBP14.57□□□□□ -0.08
LMX1B-204ENST00000561065 CCL27Q9Y4X3 112 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 A0A087WV62 115 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 C17orf51A8MQB3 221 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 MYO1GB0I1T2 1018 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 ABCB7O75027 752 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 LYPLA1O75608 230 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 TRAPPC6AO75865 159 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 GABRA1P14867 456 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 ETV4P43268 484 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 ZFP36L2P47974 494 aaKnown RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 NCBP2P52298 156 aaKnown RBP eCLIP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 KIAA0040Q15053 153 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 ZNHIT3Q15649 155 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 WIPI1Q5MNZ9 446 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 RIPPLY2Q5TAB7 128 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 TIGD3Q6B0B8 471 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 TRIM42Q8IWZ5 723 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 DMRTC2Q8IXT2 367 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 RELL2Q8NC24 303 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 PPCDCQ96CD2 204 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 TMCO6Q96DC7 493 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 ZBED6CLQ96FA7 236 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 ZNF764Q96H86 408 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 TIMP4Q99727 224 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 UGT2B28Q9BY64 529 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 PRDM14Q9GZV8 571 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 FOLH1BQ9HBA9 442 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 C3orf14Q9HBI5 128 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 ARGLU1Q9NWB6 273 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 NKIRAS1Q9NYS0 192 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 EIF3LQ9Y262 564 aaKnown RBP14.56□□□□□ -0.08
LMX1B-204ENST00000561065 PCDHGB3Q9Y5G1 929 aa14.56□□□□□ -0.08
LMX1B-204ENST00000561065 HRNRQ86YZ3 2850 aaPredicted RBP14.55□□□□□ -0.08
LMX1B-204ENST00000561065 PRAMEF25A6NGN4 478 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 ICOSLGO75144 302 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 CHRNGP07510 517 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 IFI6P09912 130 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 PRPS2P11908 318 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 CREB1P16220 341 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 HPCAL1P37235 193 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 SLC18A1P54219 525 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 DLX5P56178 289 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 STX3Q13277 289 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 CHI3L2Q15782 390 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 SMU1Q2TAY7 513 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 GALNTL6Q49A17 601 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 VASNQ6EMK4 673 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 Q6ZSR9 355 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 ZCCHC23Q6ZST2 131 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 WDSUB1Q8N9V3 476 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 FAM83FQ8NEG4 500 aaPredicted RBP14.55□□□□□ -0.08
LMX1B-204ENST00000561065 TNIP2Q8NFZ5 429 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 CEP70Q8NHQ1 597 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 RNF138Q8WVD3 245 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 SLC35A4Q96G79 324 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 PAIP2Q9BPZ3 127 aaKnown RBP14.55□□□□□ -0.08
LMX1B-204ENST00000561065 REEP4Q9H6H4 257 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 MCCC2Q9HCC0 563 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 HHATLQ9HCP6 504 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 SERHLQ9NQF3 203 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 ATAD3AQ9NVI7 634 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 SH3BP4Q9P0V3 963 aa14.55□□□□□ -0.08
LMX1B-204ENST00000561065 WDR91A4D1P6 747 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 OR6C70A6NIJ9 312 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 PLOD2O00469 737 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 PIP5K1BO14986 540 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 LSM1O15116 133 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 TSPAN2O60636 221 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 TBX19O60806 448 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 ERN1O75460 977 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 SOX30O94993 753 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 HOXD4P09016 255 aaPredicted RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 BMP7P18075 431 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 TACR1P25103 407 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 ELAVL4P26378 380 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 GPC1P35052 558 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 GCKP35557 465 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 MC3RP41968 323 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 PSMD4P55036 377 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 MANFP55145 182 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 ABCE1P61221 599 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 RPL38P63173 70 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 SNTA1Q13424 505 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 EFR3AQ14156 821 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 UGT3A2Q3SY77 523 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 VPS26BQ4G0F5 336 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 RFTN2Q52LD8 501 aaPredicted RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 TNFAIP8L3Q5GJ75 292 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 NHSL2Q5HYW2 709 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 SLC30A6Q6NXT4 461 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 POMZP3Q6PJE2 187 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 WDR53Q7Z5U6 358 aaPredicted RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 YRDCQ86U90 279 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 OR4N2Q8NGD1 307 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms