RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 WDR4P57081 412 aaKnown RBP12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 NAA20P61599 178 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 ABCA4P78363 2273 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 MAP1AP78559 2803 aaPredicted RBP12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 WIPI1Q5MNZ9 446 aaPredicted RBP12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 ANKRD26P1Q6NSI1 321 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 NUP54Q7Z3B4 507 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 WDR53Q7Z5U6 358 aaPredicted RBP12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 FAM9CQ8IZT9 166 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 WDSUB1Q8N9V3 476 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 NAXEQ8NCW5 288 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 RNF138Q8WVD3 245 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 ERP27Q96DN0 273 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 CHMP6Q96FZ7 201 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 FCRL1Q96LA6 429 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 FAM111AQ96PZ2 611 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 TIMP4Q99727 224 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 OSBPL11Q9BXB4 747 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 GLIPR2Q9H4G4 154 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 SERHLQ9NQF3 203 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 MAPRE3Q9UPY8 281 aa12.78□□□□□ -0.36
TNFAIP2-207ENST00000560562 OR6C70A6NIJ9 312 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 NPIPB8E9PQR5 432 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 AZIN1O14977 448 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 CRCPO75575 148 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 PSMG1O95456 288 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 GSTM5P46439 218 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 NCBP2P52298 156 aaKnown RBP eCLIP12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 DCAF7P61962 342 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 PSG6Q00889 435 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 ACSF3Q4G176 576 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 ZNF385BQ569K4 471 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 KANK2Q63ZY3 851 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 VASNQ6EMK4 673 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 TMEM107Q6UX40 140 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 ZCCHC23Q6ZST2 131 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 YRDCQ86U90 279 aaKnown RBP12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 LIX1Q8N485 282 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 FAM83FQ8NEG4 500 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 OR10Q1Q8NGQ4 319 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 GFM2Q969S9 779 aaKnown RBP12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 SLC35A4Q96G79 324 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 LURAP1Q96LR2 239 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 AMDHD1Q96NU7 426 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 COL21A1Q96P44 957 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 BBS4Q96RK4 519 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 ADOQ96SZ5 270 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 UGT2B28Q9BY64 529 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 GIMAP4Q9NUV9 329 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 NKIRAS1Q9NYS0 192 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 TAS2R7Q9NYW3 318 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 FLRT3Q9NZU0 649 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 GIMAP2Q9UG22 337 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 DNAJC15Q9Y5T4 150 aa12.77□□□□□ -0.37
TNFAIP2-207ENST00000560562 UPK1AO00322 258 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 TM9SF1O15321 606 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 TRIM13O60858 407 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 SEC22BO75396 215 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 REM1O75628 298 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 ZWINTO95229 277 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 LINC00032P0C843 101 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 BMP7P18075 431 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 SDC1P18827 310 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 GAS1P54826 345 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 DLX5P56178 289 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 RPP38P78345 283 aaKnown RBP12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 UGT3A2Q3SY77 523 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 RFTN2Q52LD8 501 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 CES4AQ5XG92 561 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 SLC30A6Q6NXT4 461 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 SLC44A2Q8IWA5 706 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 SAMD14Q8IZD0 417 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 ANKRD42Q8N9B4 389 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 TNIP2Q8NFZ5 429 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 OR1J4Q8NGS1 313 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 CLHC1Q8NHS4 586 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 TCP10LQ8TDR4 215 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 CIDECQ96AQ7 238 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 EFHD2Q96C19 240 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 MAGEB18Q96M61 343 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 PRDM14Q9GZV8 571 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 LRTM1Q9HBL6 345 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 MIEF1Q9NQG6 463 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 KLRF1Q9NZS2 232 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 FBXL2Q9UKC9 423 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 PCDHGB3Q9Y5G1 929 aa12.76□□□□□ -0.37
TNFAIP2-207ENST00000560562 A0A087WV62 115 aa12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 LSM1O15116 133 aaKnown RBP12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 BCAS2O75934 225 aaPredicted RBP12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 GABRA1P14867 456 aa12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 ELAVL4P26378 380 aaKnown RBP12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 MPIP34949 423 aa12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 ZFP36L2P47974 494 aaKnown RBP12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 ZNF155Q12901 538 aaPredicted RBP12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 SNTA1Q13424 505 aa12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 TOMM20Q15388 145 aa12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 ARL13AQ5H913 290 aaPredicted RBP12.75□□□□□ -0.37
TNFAIP2-207ENST00000560562 NHSL2Q5HYW2 709 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms