RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 NUP43Q8NFH3 380 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 SLC35A4Q96G79 324 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 STACQ99469 402 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 FAM173AQ9BQD7 235 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 ZCCHC3Q9NUD5 404 aaKnown RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 DTX4Q9Y2E6 619 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 ACOT7O00154 380 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CFLARO15519 480 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 MAGEA8P43361 318 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CCT3P49368 545 aaKnown RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CDK9P50750 372 aaKnown RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 PNLIPRP2P54317 469 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 MXRA7P84157 204 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 SPANXN4Q5MJ08 99 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 C16orf47Q6ZP98 133 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 ULK2Q8IYT8 1036 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 GOT1L1Q8NHS2 421 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 DOK4Q8TEW6 326 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 NR4A3Q92570 626 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 MIB2Q96AX9 1013 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 TMCO6Q96DC7 493 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 OMA1Q96E52 524 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 FRMD6Q96NE9 622 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CCDC115Q96NT0 180 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 THTPAQ9BU02 230 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 RMND5AQ9H871 391 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 DUSP22Q9NRW4 184 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 SIRT3Q9NTG7 399 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 OLAHQ9NV23 265 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 VPS4AQ9UN37 437 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 OR10H1Q9Y4A9 318 aa12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 CHCHD2Q9Y6H1 151 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-209ENST00000560448 DUXAA6NLW8 204 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 PEX1O43933 1283 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 ZNF354AO60765 605 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 SCN2BO60939 215 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 KCNH1O95259 989 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 C6orf47O95873 294 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 AGR2O95994 175 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 ABCB1P08183 1280 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 EDN3P14138 238 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 MAP3K8P41279 467 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 WNT3P56703 355 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 UFM1P61960 85 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 HBA1P69905 142 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 FOXK1P85037 733 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 TP53BP2Q13625 1128 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 DECR1Q16698 335 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 HYAL4Q2M3T9 481 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 KRTCAP3Q53RY4 240 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 ZNF324BQ6AW86 544 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 OR4F3Q6IEY1 312 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 MFSD12Q6NUT3 480 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 MDGA2Q7Z553 956 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 FUNDC1Q8IVP5 155 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 SULF2Q8IWU5 870 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 CISD2Q8N5K1 135 aaKnown RBP12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 SPPL2AQ8TCT8 520 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 GRHL3Q8TE85 626 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 RCN3Q96D15 328 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 CLPTM1LQ96KA5 538 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 COL21A1Q96P44 957 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 SLX1AQ9BQ83 275 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 KLHL1Q9NR64 748 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 LUZP4Q9P127 313 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 SLC7A8Q9UHI5 535 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 CBLCQ9ULV8 474 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 BOKQ9UMX3 212 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 FAF1Q9UNN5 650 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 SNX8Q9Y5X2 465 aa12.87□□□□□ -0.35
PKNOX1-209ENST00000560448 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 FAM234BA2RU67 622 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 J3QKU1 62 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 FBP2O00757 339 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 AIM2O14862 343 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 HS6ST1O60243 411 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 NKX2-2O95096 273 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 AK1P00568 194 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 ALOX5P09917 674 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 ZNF24P17028 368 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 UQCRC2P22695 453 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 ELAVL4P26378 380 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 IL12BP29460 328 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 PTGER1P34995 402 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 PIGAP37287 484 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 ANXA11P50995 505 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 MLLT10P55197 1068 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 MAPRE2Q15555 327 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 AGKQ53H12 422 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 EXOSC6Q5RKV6 272 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 SLC30A6Q6NXT4 461 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 CDC73Q6P1J9 531 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 SZRD1Q7Z422 152 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 NET1Q7Z628 596 aaPredicted RBP12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 SLC22A16Q86VW1 577 aa12.86□□□□□ -0.35
PKNOX1-209ENST00000560448 SLC44A2Q8IWA5 706 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms