RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 STACQ99469 402 aa20.03■□□□□ 0.8
SNX1-210ENST00000560260 OR51I1Q9H343 314 aa20.03■□□□□ 0.8
SNX1-210ENST00000560260 PIGUQ9H490 435 aa20.03■□□□□ 0.8
SNX1-210ENST00000560260 KLHL1Q9NR64 748 aa20.03■□□□□ 0.8
SNX1-210ENST00000560260 VAPAQ9P0L0 249 aa20.03■□□□□ 0.8
SNX1-210ENST00000560260 CBLCQ9ULV8 474 aa20.03■□□□□ 0.8
SNX1-210ENST00000560260 FAF1Q9UNN5 650 aaPredicted RBP20.03■□□□□ 0.8
SNX1-210ENST00000560260 CHCHD2Q9Y6H1 151 aaPredicted RBP20.03■□□□□ 0.8
SNX1-210ENST00000560260 A0A0G2JMM0 328 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 A0A1W2PPB8 328 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 A0A1W2PRS3 328 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 KIR3DP1A8MWS1 328 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 ANGPT2O15123 496 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 ANP32DO95626 131 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 SP1P08047 785 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 MRPS22P82650 360 aaKnown RBP20.02■□□□□ 0.8
SNX1-210ENST00000560260 CYP27C1Q4G0S4 372 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 ZNF766Q5HY98 468 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 REP15Q6BDI9 236 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 TNFAIP8L2Q6P589 184 aaPredicted RBP20.02■□□□□ 0.8
SNX1-210ENST00000560260 BHLHB9Q6PI77 547 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 RTL4Q6ZR62 310 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 ZAR1Q86SH2 424 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 GALNT10Q86SR1 603 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 RNF130Q86XS8 419 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 DPP10Q8N608 796 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 HORMAD2Q8N7B1 307 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 TEX19Q8NA77 164 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 FAM13CQ8NE31 585 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 PAQR8Q8TEZ7 354 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 TPT1P8Q9HAU6 139 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 DUSP22Q9NRW4 184 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 DEPPQ9NTK1 212 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 FBXO34Q9NWN3 711 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 FLRT3Q9NZU0 649 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 CNOT11Q9UKZ1 510 aaKnown RBP20.02■□□□□ 0.8
SNX1-210ENST00000560260 PCDHGA10Q9Y5H3 936 aa20.02■□□□□ 0.8
SNX1-210ENST00000560260 LOC100653049A0A140TA62 436 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 CAPN14A8MX76 684 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 G3V3Y1 287 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 NME2P1O60361 137 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 C1QL1O75973 258 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 KRT34O76011 436 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 SORBS2O94875 1100 aaKnown RBP20.02■□□□□ 0.79
SNX1-210ENST00000560260 KRT16P08779 473 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 NAGAP17050 411 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 NME2P22392 152 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 PIGAP37287 484 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 FUT5Q11128 374 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 CCNJQ5T5M9 372 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 GKAP1Q5VSY0 366 aaPredicted RBP20.02■□□□□ 0.79
SNX1-210ENST00000560260 BICRALQ6AI39 1079 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 SLC25A25Q6KCM7 469 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 FIGNL1Q6PIW4 674 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 GALNTL5Q7Z4T8 443 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 DHDDSQ86SQ9 333 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 COX18Q8N8Q8 333 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 ANKS4BQ8N8V4 417 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 GOLM1Q8NBJ4 401 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 PSD4Q8NDX1 1056 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 FAM110BQ8TC76 370 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 ADAMTS15Q8TE58 950 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 RAB8BQ92930 207 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 NODALQ96S42 347 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 ADOQ96SZ5 270 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 IKZF5Q9H5V7 419 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 PROK2Q9HC23 129 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 RYDENQ9NUL5 291 aaKnown RBP20.02■□□□□ 0.79
SNX1-210ENST00000560260 GIN1Q9NXP7 522 aa20.02■□□□□ 0.79
SNX1-210ENST00000560260 FAM208BQ5VWN6 2430 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 EML6Q6ZMW3 1958 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 PRAMEF27A3QJZ7 478 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 REM1O75628 298 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 KCNK2O95069 426 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 UNC5CO95185 931 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 KCNH1O95259 989 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 IL33O95760 270 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 OR12D1P0DN82 309 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 CD46P15529 392 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 TMED10P49755 219 aaKnown RBP20.01■□□□□ 0.79
SNX1-210ENST00000560260 MAPRE2Q15555 327 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 ANGPTL8Q6UXH0 198 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 OLIG3Q7RTU3 272 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 DND1Q8IYX4 353 aaKnown RBP20.01■□□□□ 0.79
SNX1-210ENST00000560260 C10orf111Q8N326 155 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 SPPL2AQ8TCT8 520 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 DIO2Q92813 273 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 SGCZQ96LD1 299 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 C5orf34Q96MH7 638 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 COL21A1Q96P44 957 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 CPPED1Q9BRF8 314 aaPredicted RBP20.01■□□□□ 0.79
SNX1-210ENST00000560260 TIMMDC1Q9NPL8 285 aa20.01■□□□□ 0.79
SNX1-210ENST00000560260 SPTA1P02549 2419 aa20■□□□□ 0.79
SNX1-210ENST00000560260 PINLYPA6NC86 204 aa20■□□□□ 0.79
SNX1-210ENST00000560260 OR6C70A6NIJ9 312 aa20■□□□□ 0.79
SNX1-210ENST00000560260 FXYD1O00168 92 aa20■□□□□ 0.79
SNX1-210ENST00000560260 HMGN4O00479 90 aa20■□□□□ 0.79
SNX1-210ENST00000560260 MRASO14807 208 aa20■□□□□ 0.79
SNX1-210ENST00000560260 COX4I1P13073 169 aa20■□□□□ 0.79
SNX1-210ENST00000560260 CYP4B1P13584 511 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms