RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PRICKLE4Q2TBC4 344 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 PGGHGQ32M88 737 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 C6orf163Q5TEZ5 329 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 ARIH2OSQ8N7S6 290 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 OR4K14Q8NGD5 310 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 OR6K3Q8NGY3 331 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 RNF138Q8WVD3 245 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 TMBIM1Q969X1 311 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 TMCO6Q96DC7 493 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 DTNBP1Q96EV8 351 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 COL21A1Q96P44 957 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 TNFRSF13CQ96RJ3 184 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 RHNO1Q9BSD3 238 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 NTMT1Q9BV86 223 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 SHARPINQ9H0F6 387 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 BCAP29Q9UHQ4 241 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 ZNF639Q9UID6 485 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 PLLPQ9Y342 182 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 ZNF337Q9Y3M9 751 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 TSC22D4Q9Y3Q8 395 aa11.47□□□□□ -0.57
RABGGTA-213ENST00000560127 A0A1W2PP18 115 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 KIF2AO00139 706 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 CLOCKO15516 846 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 SSX4O60224 188 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 REM1O75628 298 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 CBX7O95931 251 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 CCDC166P0CW27 439 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 PORP16435 677 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 DRD5P21918 477 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 PTX3P26022 381 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 SLC6A8P48029 635 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 CASP9P55211 416 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 DSCR4P56555 118 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 CLDN20P56880 219 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 MAP4K2Q12851 820 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 CALCOCO2Q13137 446 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 CTU2Q2VPK5 515 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 NCMAPQ5T1S8 102 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 ALKBH2Q6NS38 261 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 DNAJC14Q6Y2X3 702 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 GBP7Q8N8V2 638 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 ADCY4Q8NFM4 1077 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 OR10H5Q8NGA6 315 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 OR5M1Q8NGP8 315 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 EXT2Q93063 718 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 TRIM44Q96DX7 344 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 C11orf24Q96F05 449 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 SLC35A4Q96G79 324 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 HS6ST2Q96MM7 605 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 BRINP2Q9C0B6 783 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 RAB17Q9H0T7 212 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 OR10A4Q9H209 315 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 RHOJQ9H4E5 214 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 CAB39LQ9H9S4 337 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 BARX1Q9HBU1 254 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 MAT2BQ9NZL9 334 aa11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 UTP11Q9Y3A2 253 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-213ENST00000560127 TCRBV9S1A1TA0A576 114 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 FAM234BA2RU67 622 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 FAM159BA6NKW6 160 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 K7EPI3 171 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 EIF3HO15372 352 aaKnown RBP eCLIP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 TSPAN2O60636 221 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 ALDOAP04075 364 aaKnown RBP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 CD3EP07766 207 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 HK1P19367 917 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 PSMB1P20618 241 aaKnown RBP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 IL11P20809 199 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 PPICP45877 212 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 EMDP50402 254 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 LOXL1Q08397 574 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 MGAT5Q09328 741 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 CUL3Q13618 768 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 RAET1LQ5VY80 246 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 ATG4DQ86TL0 474 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 NUDT13Q86X67 352 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 METTL25Q8N6Q8 603 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 FADS6Q8N9I5 356 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 OR4K17Q8NGC6 315 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 OR52R1Q8NGF1 315 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 KIF18AQ8NI77 898 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 ADOQ96SZ5 270 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 TRAF4Q9BUZ4 470 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 PLA2G12AQ9BZM1 189 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 DSN1Q9H410 356 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 ESRP2Q9H6T0 727 aaKnown RBP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 CLEC4AQ9UMR7 237 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 GPR52Q9Y2T5 361 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 GPR55Q9Y2T6 319 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 MTO1Q9Y2Z2 717 aaKnown RBP11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 EMC9Q9Y3B6 208 aa11.45□□□□□ -0.58
RABGGTA-213ENST00000560127 OR2M5A3KFT3 312 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 H3BML4 177 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 PHGDHO43175 533 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 KCNAB3O43448 404 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 SPRY1O43609 319 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 S100BP04271 92 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 CTAGE8P0CG41 777 aa11.44□□□□□ -0.58
RABGGTA-213ENST00000560127 FCGR2AP12318 317 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms