RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 NTNG2Q96CW9 530 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 MTERF3Q96E29 417 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 ZBED6CLQ96FA7 236 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 C16orf58Q96GQ5 468 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 TMEM41AQ96HV5 264 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 DMRTA2Q96SC8 542 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 LMF2Q9BU23 707 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 SERHLQ9NQF3 203 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 SIRT3Q9NTG7 399 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 B4GALT7Q9UBV7 327 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 HAO1Q9UJM8 370 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 SLC6A5Q9Y345 797 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 KIAA1549Q9HCM3 1950 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 A0A1B0GVC2 190 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 A0A1W2PRB8 838 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 B4DXG7 233 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 AQP7O14520 342 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 SNPHO15079 494 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 SCO2O43819 266 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 SNNO75324 88 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 C6orf47O95873 294 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 IGKV1D-16P01601 117 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 ACP2P11117 423 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 TCEA1P23193 301 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 PTPN6P29350 595 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 NME5P56597 212 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 PGS1Q32NB8 556 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 TTMPQ5BVD1 217 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 WIPI1Q5MNZ9 446 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 AGBL2Q5U5Z8 902 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 TIGD3Q6B0B8 471 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 SLC30A6Q6NXT4 461 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 YRDCQ86U90 279 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 HOMEZQ8IX15 550 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 RIMKLAQ8IXN7 391 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 OR1J4Q8NGS1 313 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 TMCO6Q96DC7 493 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 GIMAP5Q96F15 307 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 UBQLN3Q9H347 655 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 ACSS1Q9NUB1 689 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 ALKBH4Q9NXW9 302 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 NOP53Q9NZM5 478 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 ACAD8Q9UKU7 415 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 CBLCQ9ULV8 474 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 SNX8Q9Y5X2 465 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 PCNX3Q9H6A9 2034 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 NUP214P35658 2090 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 PCNX1Q96RV3 2341 aa13.55□□□□□ -0.24
RABGGTA-211ENST00000559850 C15orf38-AP3S2A0A0A6YYH1 394 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 GOLGA8QA0A0J9YX86 632 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 GOLGA8OA6NCC3 632 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 PRSS44E7EML9 344 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 E9PLN8 166 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 GOLGA8NF8WBI6 632 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 SDHDO14521 159 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 EMC8O43402 210 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 PNLIPRP2P54317 469 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 CLDN8P56748 225 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 EFR3AQ14156 821 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 ZNHIT3Q15649 155 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 MTFR2Q6P444 385 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 CLECL1Q8IZS7 167 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 CLEC4FQ8N1N0 589 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 ZNF808Q8N4W9 903 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 WDSUB1Q8N9V3 476 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 GPR151Q8TDV0 419 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 SLC9A6Q92581 669 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 FAM120BQ96EK7 910 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 RMND5BQ96G75 393 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 VKORC1Q9BQB6 163 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 RTN4RQ9BZR6 473 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 TP63Q9H3D4 680 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 WDR55Q9H6Y2 383 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 CXorf36Q9H7Y0 433 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 MANSC1Q9H8J5 431 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 Q9N2J8 555 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 ACKR4Q9NPB9 350 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 ZCCHC3Q9NUD5 404 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 RYDENQ9NUL5 291 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 FBXL2Q9UKC9 423 aa13.54□□□□□ -0.24
RABGGTA-211ENST00000559850 KDM4EB2RXH2 506 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 BCKDKO14874 412 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 SUSD5O60279 629 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 HCN1O60741 890 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 HPNP05981 417 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 H2AFXP16104 143 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 PRPS1L1P21108 318 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 RPL3P39023 403 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 DCTP40126 519 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 SLC18A1P54219 525 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 NUP107P57740 925 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 STX5Q13190 355 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 MAD2L1Q13257 205 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 DUSP5Q16690 384 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 DCST1Q5T197 706 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 RTL6Q6ICC9 239 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms