RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 C6orf136Q5SQH8 315 aa13.51□□□□□ -0.25
RPL28-208ENST00000559463 TMEM211Q6ICI0 200 aa13.51□□□□□ -0.25
RPL28-208ENST00000559463 LARP4Q71RC2 724 aaKnown RBP eCLIP13.51□□□□□ -0.253e-49■■□□□ 12.3
RPL28-208ENST00000559463 LIX1Q8N485 282 aa13.51□□□□□ -0.25
RPL28-208ENST00000559463 OR1J4Q8NGS1 313 aa13.51□□□□□ -0.25
RPL28-208ENST00000559463 PPP1R14CQ8TAE6 165 aa13.51□□□□□ -0.25
RPL28-208ENST00000559463 EFHD2Q96C19 240 aaPredicted RBP13.51□□□□□ -0.25
RPL28-208ENST00000559463 TMEM114B3SHH9 223 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 B4DXG7 233 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 SCAMP2O15127 329 aaKnown RBP13.5□□□□□ -0.25
RPL28-208ENST00000559463 WDR1O75083 606 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 HSPA4LO95757 839 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 EFNA1P20827 205 aaPredicted RBP13.5□□□□□ -0.25
RPL28-208ENST00000559463 BGNP21810 368 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 MAPK1P28482 360 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 IL12BP29460 328 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 PNLIPRP2P54317 469 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 GAS1P54826 345 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 PSPHP78330 225 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 CRYZQ08257 329 aaKnown RBP13.5□□□□□ -0.25
RPL28-208ENST00000559463 PMPCAQ10713 525 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 EFR3AQ14156 821 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 PTGR1Q14914 329 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 EIPR1Q53HC9 387 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 WLSQ5T9L3 541 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 ZNF781Q8N8C0 355 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 WDSUB1Q8N9V3 476 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 OR7A2PQ8NGA2 310 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 TMCO6Q96DC7 493 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 MTERF3Q96E29 417 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 ZBED6CLQ96FA7 236 aaPredicted RBP13.5□□□□□ -0.25
RPL28-208ENST00000559463 SORT1Q99523 831 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 LMF2Q9BU23 707 aaKnown RBP13.5□□□□□ -0.25
RPL28-208ENST00000559463 FLRT3Q9NZU0 649 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 SH3BP4Q9P0V3 963 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 ATP6V1HQ9UI12 483 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 MAPRE3Q9UPY8 281 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 RNF6Q9Y252 685 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 SLC6A5Q9Y345 797 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 OR10H1Q9Y4A9 318 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 WIF1Q9Y5W5 379 aa13.5□□□□□ -0.25
RPL28-208ENST00000559463 PDZD2O15018 2839 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 C15orf38-AP3S2A0A0A6YYH1 394 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 C17orf51A8MQB3 221 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 HNRNPRO43390 633 aaKnown RBP13.49□□□□□ -0.25
RPL28-208ENST00000559463 GLI4P10075 376 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 CYP4B1P13584 511 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 PRF1P14222 555 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 HPCAL1P37235 193 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 GAB1Q13480 694 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 TOMM20Q15388 145 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 PDCD2Q16342 344 aaPredicted RBP13.49□□□□□ -0.25
RPL28-208ENST00000559463 CYP27C1Q4G0S4 372 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 WIPI1Q5MNZ9 446 aaPredicted RBP13.49□□□□□ -0.25
RPL28-208ENST00000559463 BEND6Q5SZJ8 279 aaPredicted RBP13.49□□□□□ -0.25
RPL28-208ENST00000559463 DCST1Q5T197 706 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 C1orf185Q5T7R7 199 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 IL23RQ5VWK5 629 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 B3GNT6Q6ZMB0 384 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 CROCCP2Q86T23 111 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 CCDC71Q8IV32 467 aaPredicted RBP13.49□□□□□ -0.25
RPL28-208ENST00000559463 FNDC5Q8NAU1 212 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 FAM83FQ8NEG4 500 aaPredicted RBP13.49□□□□□ -0.25
RPL28-208ENST00000559463 ZFP28Q8NHY6 868 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 CA5BP1Q8WTZ4 195 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 NUDT8Q8WV74 236 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 RND1Q92730 232 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 HOXB13Q92826 284 aaPredicted RBP13.49□□□□□ -0.25
RPL28-208ENST00000559463 GIMAP5Q96F15 307 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 TTYH2Q9BSA4 534 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 KCNK9Q9NPC2 374 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 CHST11Q9NPF2 352 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 EQTNQ9NQ60 294 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 SERHLQ9NQF3 203 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 ACSS1Q9NUB1 689 aaPredicted RBP13.49□□□□□ -0.25
RPL28-208ENST00000559463 COQ3Q9NZJ6 369 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 NTMQ9P121 344 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 CBLCQ9ULV8 474 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 PCDHGB3Q9Y5G1 929 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 CREBBPQ92793 2442 aa13.49□□□□□ -0.25
RPL28-208ENST00000559463 HEATR5AQ86XA9 2040 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 GXYLT2A0PJZ3 443 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 KDM4EB2RXH2 506 aaPredicted RBP13.48□□□□□ -0.25
RPL28-208ENST00000559463 MYZAPP0CAP1 466 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 LAMP1P11279 417 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 EVI2BP34910 448 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 GPC1P35052 558 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 KRT20P35900 424 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 ADH7P40394 386 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 MAP3K8P41279 467 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 KIR3DL1P43629 444 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 SLC1A6P48664 564 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 MANFP55145 182 aaKnown RBP13.48□□□□□ -0.25
RPL28-208ENST00000559463 ZNHIT3Q15649 155 aaPredicted RBP13.48□□□□□ -0.25
RPL28-208ENST00000559463 NHSL2Q5HYW2 709 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 VASNQ6EMK4 673 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 ACAD11Q709F0 780 aa13.48□□□□□ -0.25
RPL28-208ENST00000559463 R3HCC1LQ7Z5L2 792 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms