RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SLC25A37Q9NYZ2 338 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 SLAMF8Q9P0V8 285 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 PCDHB14Q9Y5E9 798 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 PCDHGA10Q9Y5H3 936 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 CHCHD2Q9Y6H1 151 aaPredicted RBP19.95■□□□□ 0.78
SNX1-206ENST00000559389 OR6C70A6NIJ9 312 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 ASNA1O43681 348 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 ABCB7O75027 752 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 UGT2B11O75310 529 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 SORBS2O94875 1100 aaKnown RBP19.94■□□□□ 0.78
SNX1-206ENST00000559389 KCNH1O95259 989 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 KRT75O95678 551 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 SP1P08047 785 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 CCL3P10147 92 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 MATN1P21941 496 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 KRT20P35900 424 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 PLEKHN1Q494U1 663 aaPredicted RBP19.94■□□□□ 0.78
SNX1-206ENST00000559389 SOWAHCQ53LP3 525 aaPredicted RBP19.94■□□□□ 0.78
SNX1-206ENST00000559389 SLC25A25Q6KCM7 469 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 ANGPTL8Q6UXH0 198 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 DHDDSQ86SQ9 333 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 RNF130Q86XS8 419 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 TREML1Q86YW5 311 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 BCORP1Q8N888 145 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 TMEM178AQ8NBL3 297 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 FAM13CQ8NE31 585 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 DNAJB8Q8NHS0 232 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 ADAMTS15Q8TE58 950 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 PAQR8Q8TEZ7 354 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 CDS1Q92903 461 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 COL21A1Q96P44 957 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 OR51I1Q9H343 314 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 TPT1P8Q9HAU6 139 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 VAPAQ9P0L0 249 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 LUZP4Q9P127 313 aa19.94■□□□□ 0.78
SNX1-206ENST00000559389 NUP214P35658 2090 aaPredicted RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 ATMQ13315 3056 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 REM1O75628 298 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 DCTN3O75935 186 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 SOX30O94993 753 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 IGKV1D-16P01601 117 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 IL12BP29460 328 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 MAGEA8P43361 318 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 MVDP53602 400 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 TXNL4AP83876 142 aaKnown RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 DECR1Q16698 335 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 REP15Q6BDI9 236 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 TNFAIP8L2Q6P589 184 aaPredicted RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 DLEU7Q6UYE1 221 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 FBXW8Q8N3Y1 598 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 CCDC197Q8NCU1 140 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 OR5M3Q8NGP4 307 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 PNPT1Q8TCS8 783 aaKnown RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 SPPL2AQ8TCT8 520 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 DIO2Q92813 273 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 EFHD2Q96C19 240 aaPredicted RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 ADOQ96SZ5 270 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 SECISBP2Q96T21 854 aaKnown RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 BTBD2Q9BX70 525 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 KLHL1Q9NR64 748 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 ANAPC2Q9UJX6 822 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 MRTO4Q9UKD2 239 aaKnown RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 CNOT11Q9UKZ1 510 aaKnown RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 KLF13Q9Y2Y9 288 aaPredicted RBP19.93■□□□□ 0.78
SNX1-206ENST00000559389 GMEB1Q9Y692 573 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 KCNE3Q9Y6H6 103 aa19.93■□□□□ 0.78
SNX1-206ENST00000559389 DUXAA6NLW8 204 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 TP53I11O14683 189 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 KCNK2O95069 426 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 IL33O95760 270 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 PNLIPRP2P54317 469 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 CASP9P55211 416 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 POU6F2P78424 691 aaPredicted RBP19.92■□□□□ 0.78
SNX1-206ENST00000559389 NFYCQ13952 458 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 CYLC2Q14093 348 aaPredicted RBP19.92■□□□□ 0.78
SNX1-206ENST00000559389 EFR3AQ14156 821 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 INAQ16352 499 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.92■□□□□ 0.78
SNX1-206ENST00000559389 COLEC12Q5KU26 742 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 DESI1Q6ICB0 168 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 RPUSD3Q6P087 351 aaKnown RBP19.92■□□□□ 0.78
SNX1-206ENST00000559389 NUP54Q7Z3B4 507 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 GALNTL5Q7Z4T8 443 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 OR52N2Q8NGI0 321 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 RP9Q8TA86 221 aaKnown RBP19.92■□□□□ 0.78
SNX1-206ENST00000559389 FAM110BQ8TC76 370 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 SACM1LQ9NTJ5 587 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 CNIH4Q9P003 139 aa19.92■□□□□ 0.78
SNX1-206ENST00000559389 NDUFAB1O14561 156 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 MRASO14807 208 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 AGR2O95994 175 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 CYP4B1P13584 511 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 ANXA11P50995 505 aaKnown RBP19.91■□□□□ 0.78
SNX1-206ENST00000559389 PSMD4P55036 377 aaKnown RBP19.91■□□□□ 0.78
SNX1-206ENST00000559389 RPP38P78345 283 aaKnown RBP19.91■□□□□ 0.78
SNX1-206ENST00000559389 TRMT5Q32P41 509 aaKnown RBP19.91■□□□□ 0.78
SNX1-206ENST00000559389 COX20Q5RI15 118 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 DCST2Q5T1A1 773 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 CCNJQ5T5M9 372 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 SLC22A10Q63ZE4 541 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms