RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 ALOX5P09917 674 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 ACP2P11117 423 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 GABRA3P34903 492 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 PIGAP37287 484 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 RFC3P40938 356 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 MAP3K8P41279 467 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 TDGF1P3P51864 188 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 POLR2JP52435 117 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 PNLIPRP2P54317 469 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 PSMD4P55036 377 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 PLGLB1Q02325 96 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 TMEM81Q6P7N7 255 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 OR4N2Q8NGD1 307 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 OR9I1Q8NGQ6 314 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 FBXO30Q8TB52 745 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 TMCO6Q96DC7 493 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 ZNF597Q96LX8 424 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 ADOQ96SZ5 270 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 METTL7AQ9H8H3 244 aa17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 GCN1Q92616 2671 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-208ENST00000558954 FAM234BA2RU67 622 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 ANKUB1A6NFN9 424 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 PYCARD-AS1I3L0S3 204 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 HS6ST1O60243 411 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 TSPAN2O60636 221 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 SOX30O94993 753 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 SNX4O95219 450 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 KCNH1O95259 989 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 CPSF4O95639 269 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 UQCRC2P22695 453 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 MST1P26927 711 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 ATP4BP51164 291 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 SNTA1Q13424 505 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 GAB1Q13480 694 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 ELOAQ14241 798 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 SQLEQ14534 574 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 TIGD2Q4W5G0 525 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 RNFT1Q5M7Z0 435 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 EXOSC6Q5RKV6 272 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 CDC73Q6P1J9 531 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 PAOXQ6QHF9 649 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 MSANTD1Q6ZTZ1 278 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 SLC22A16Q86VW1 577 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 TRIML2Q8N7C3 387 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 COX18Q8N8Q8 333 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 SLC16A11Q8NCK7 471 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 GOT1L1Q8NHS2 421 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 EFHD2Q96C19 240 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 CHMP6Q96FZ7 201 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 RMND5BQ96G75 393 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 PANX1Q96RD7 426 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 STACQ99469 402 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 ACTRT3Q9BYD9 372 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 TTTY12Q9BZ98 90 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 TSPAN10Q9H1Z9 355 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 RMND5AQ9H871 391 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 IL1RL2Q9HB29 575 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 DUSP22Q9NRW4 184 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 GPATCH2Q9NW75 528 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 TMEM45AQ9NWC5 275 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 KLRF1Q9NZS2 232 aa17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 UBR5O95071 2799 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-208ENST00000558954 PCNX3Q9H6A9 2034 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 PINLYPA6NC86 204 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 PRAMEF25A6NGN4 478 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 CASP3P42574 277 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 ZFP36L2P47974 494 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 RCAN2Q14206 197 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 DUSP5Q16690 384 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 BICRALQ6AI39 1079 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 SLC30A6Q6NXT4 461 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 BNC2Q6ZN30 1099 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 PACS2Q86VP3 889 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 SIAH3Q8IW03 269 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 PIK3R3Q92569 461 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 C16orf58Q96GQ5 468 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 SLC35G5Q96KT7 338 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 YIPF4Q9BSR8 244 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 OSBPL11Q9BXB4 747 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 TMEM120AQ9BXJ8 343 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 ANGPTL4Q9BY76 406 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 RABEP2Q9H5N1 569 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 PROK2Q9HC23 129 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 GIN1Q9NXP7 522 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 TUBA8Q9NY65 449 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 B4GALT7Q9UBV7 327 aa17.31■□□□□ 0.36
RABGGTA-208ENST00000558954 GXYLT2A0PJZ3 443 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 NPIPA5E9PKD4 350 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 RFXANKO14593 260 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 GLSO94925 669 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 WISP1O95388 367 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 CBX6O95503 412 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 IL33O95760 270 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 NCF2P19878 526 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 RFX3P48380 749 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 MASP1P48740 699 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 KCNK10P57789 538 aa17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 PPIAP62937 165 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-208ENST00000558954 FOXO1Q12778 655 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms