RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CH25HO95992 272 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 IGHA1P01876 353 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 GPR1P46091 355 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 MTNR1BP49286 362 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 PRKAG1P54619 331 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 FCN2Q15485 313 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 PLA1AQ53H76 456 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 CCNJQ5T5M9 372 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 RAET1GQ6H3X3 334 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 TMEM107Q6UX40 140 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 TMEM91Q6ZNR0 172 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 ASB18Q6ZVZ8 466 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 PARS2Q7L3T8 475 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 LRRC28Q86X40 367 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 KLBQ86Z14 1044 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 DNAJC5GQ8N7S2 189 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 OR5M3Q8NGP4 307 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 OR5AR1Q8NGP9 310 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF431Q8TF32 576 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 IRF7Q92985 503 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 MARVELD3Q96A59 401 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 MRGPRX3Q96LB0 322 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 GPR137Q96N19 417 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 THAP7Q9BT49 309 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 LHX9Q9NQ69 397 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 MED17Q9NVC6 651 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 SRRDQ9UH36 339 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 ADAM29Q9UKF5 820 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 LIPT1Q9Y234 373 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 PRRC2BQ5JSZ5 2229 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 LOC105371267A0A1B0GV96 52 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 GTPBP1O00178 669 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 SURF4O15260 269 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 GNSP15586 552 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 NTSP30990 170 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 TRIM23P36406 574 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 CCR8P51685 355 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 NCBP2P52298 156 aaKnown RBP eCLIP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 HBMQ6B0K9 141 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC30A6Q6NXT4 461 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF322Q6U7Q0 402 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF547Q8IVP9 402 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 DCUN1D3Q8IWE4 304 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 OR2L2Q8NH16 312 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 MAP6Q96JE9 813 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF649Q9BS31 505 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 ABCG5Q9H222 651 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 LINC00597Q9H2U6 94 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 RANBP3Q9H6Z4 567 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 ENAMQ9NRM1 1142 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 CYSLTR2Q9NS75 346 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 CUEDC1Q9NWM3 386 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 H2AFY2Q9P0M6 372 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 TNFRSF10DQ9UBN6 386 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 MYO10Q9HD67 2058 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 LRRK1Q38SD2 2015 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 FEZF1A0PJY2 475 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 K7ESM1 405 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 PAHP00439 452 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 DRD2P14416 443 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 SYN1P17600 705 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 STOMP27105 288 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 HTR1FP30939 366 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 CA8P35219 290 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 STAT5AP42229 794 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 PER3P56645 1201 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 TRA2BP62995 288 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 REEP5Q00765 189 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 ST3GAL3Q11203 375 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 BCL2L15Q5TBC7 163 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 VASNQ6EMK4 673 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 BHLHB9Q6PI77 547 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 SIX5Q8N196 739 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 OR4Q3Q8NH05 313 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 BBS4Q96RK4 519 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 YIPF4Q9BSR8 244 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 EMC7Q9NPA0 242 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 WASH6PQ9NQA3 447 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC35C2Q9NQQ7 365 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 IMP3Q9NV31 184 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 MAT2BQ9NZL9 334 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 KCNN3Q9UGI6 736 aa11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 ZFR2Q9UPR6 939 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-211ENST00000557658 BRCA2P51587 3418 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 CPSF4LA6NMK7 179 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 B8ZZF3 427 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 SYT5O00445 386 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 BTN3A3O00478 584 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 KPNA3O00505 521 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 RNF13O43567 381 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 SLC22A5O76082 557 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 RBMS1P29558 406 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 OMPP47874 163 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 TM4SF4P48230 202 aa11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 RNF144AP50876 292 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-211ENST00000557658 BDH1Q02338 343 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms