RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ACSL5Q9ULC5 683 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 TRAPPC4Q9Y296 219 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 CSNK1G3Q9Y6M4 447 aa16.61■□□□□ 0.25
XRCC3-218ENST00000557439 KNL1Q8NG31 2342 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.6■□□□□ 0.25
XRCC3-218ENST00000557439 ZC3H12DA2A288 527 aaKnown RBP16.6■□□□□ 0.25
XRCC3-218ENST00000557439 ISM1B1AKI9 464 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 ACP2P11117 423 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 F3P13726 295 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 CCNJQ5T5M9 372 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 MRM1Q6IN84 353 aaKnown RBP16.6■□□□□ 0.25
XRCC3-218ENST00000557439 TMEM255BQ8WV15 326 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 RAB7BQ96AH8 199 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 DDX28Q9NUL7 540 aaKnown RBP16.6■□□□□ 0.25
XRCC3-218ENST00000557439 CA5BQ9Y2D0 317 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 SF3B6Q9Y3B4 125 aaKnown RBP16.6■□□□□ 0.25
XRCC3-218ENST00000557439 N6AMT1Q9Y5N5 214 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 SHISA3A0PJX4 238 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 FABP12A6NFH5 140 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 BTN3A3O00478 584 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 SLC31A1O15431 190 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 PRODHO43272 600 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 TMCC2O75069 709 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 ASGR2P07307 311 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 CSF3P09919 207 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 NR2F6P10588 404 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 ID2Q02363 134 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 BCL2A1Q16548 175 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 KIAA1211LQ6NV74 962 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 SLC48A1Q6P1K1 146 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 CD300LDQ6UXZ3 194 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 SLC36A4Q6YBV0 504 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 GDPGP1Q6ZNW5 385 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 NRMQ8IXM6 262 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 TMEFF1Q8IYR6 380 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 TMCO6Q96DC7 493 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 ELP4Q96EB1 424 aa16.6■□□□□ 0.25
XRCC3-218ENST00000557439 ALPPP05187 535 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 DDX5P17844 614 aaKnown RBP16.59■□□□□ 0.25
XRCC3-218ENST00000557439 CSNK2A2P19784 350 aaPredicted RBP16.59■□□□□ 0.25
XRCC3-218ENST00000557439 TGM3Q08188 693 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 GLYR1Q49A26 553 aaPredicted RBP16.59■□□□□ 0.25
XRCC3-218ENST00000557439 C6orf183Q5T699 404 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 C16orf62Q7Z3J2 963 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 RD3Q7Z3Z2 195 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 RAB42Q8N4Z0 105 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 OR2L5Q8NG80 312 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 OR2L8Q8NGY9 312 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 ZCCHC10Q8TBK6 192 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 DIO2Q92813 273 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 SLC35A4Q96G79 324 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 ART5Q96L15 291 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 PINK1Q9BXM7 581 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 BTBD1Q9H0C5 482 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 C11orf54Q9H0W9 315 aaPredicted RBP16.59■□□□□ 0.25
XRCC3-218ENST00000557439 SLC13A4Q9UKG4 626 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 SPEGQ15772 3267 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 A0A0G2JPF8 293 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 SLC35F4A4IF30 521 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 SYNDIG1LA6NDD5 238 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 HNRNPCL2B2RXH8 293 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 HNRNPCL3B7ZW38 293 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 COQ9O75208 318 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 KRT8P05787 483 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 HNRNPCL4P0DMR1 293 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 FCARP24071 287 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 AK4P27144 223 aaPredicted RBP16.59■□□□□ 0.25
XRCC3-218ENST00000557439 APEX1P27695 318 aaKnown RBP16.59■□□□□ 0.25
XRCC3-218ENST00000557439 CDH11P55287 796 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 TRA2BP62995 288 aaKnown RBP16.59■□□□□ 0.25
XRCC3-218ENST00000557439 RRM2BQ7LG56 351 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 OR14C36Q8NHC7 312 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 CDS1Q92903 461 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 SPATA5L1Q9BVQ7 753 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 GIMAP4Q9NUV9 329 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 MYO15AQ9UKN7 3530 aa16.59■□□□□ 0.25
XRCC3-218ENST00000557439 IQCMA0A1B0GVH7 501 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 C2orf92A0A1B0GVN3 265 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 CDC42EP2O14613 210 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 CCNYL3P0C7X3 344 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 ACADMP11310 421 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 OMPP47874 163 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 KRR1Q13601 381 aaKnown RBP16.58■□□□□ 0.25
XRCC3-218ENST00000557439 PYDC2Q56P42 97 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 C3orf38Q5JPI3 329 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 ATP6V1C2Q8NEY4 427 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 OR7G2Q8NG99 324 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 KCTD7Q96MP8 289 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 MKRN2Q9H000 416 aaKnown RBP16.58■□□□□ 0.25
XRCC3-218ENST00000557439 PHPT1Q9NRX4 125 aaPredicted RBP16.58■□□□□ 0.25
XRCC3-218ENST00000557439 ZNF221Q9UK13 617 aa16.58■□□□□ 0.25
XRCC3-218ENST00000557439 A0A1W2PQU0 124 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 SOCS6O14544 535 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 EMC8O43402 210 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 PROM1O43490 865 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 PRICKLE3O43900 615 aaPredicted RBP16.58■□□□□ 0.24
XRCC3-218ENST00000557439 CELP19835 753 aa16.58■□□□□ 0.24
XRCC3-218ENST00000557439 RGS8P57771 180 aaPredicted RBP16.58■□□□□ 0.24
XRCC3-218ENST00000557439 STXBP1P61764 594 aaKnown RBP16.58■□□□□ 0.24
XRCC3-218ENST00000557439 BNC1Q01954 994 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms