RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CNPY4Q8N129 248 aa14.42□□□□□ -0.1
TUBB3-213ENST00000557262 INTS12Q96CB8 462 aaKnown RBP14.42□□□□□ -0.1
TUBB3-213ENST00000557262 BBS4Q96RK4 519 aa14.42□□□□□ -0.1
TUBB3-213ENST00000557262 SFXN3Q9BWM7 321 aa14.42□□□□□ -0.1
TUBB3-213ENST00000557262 RBM24Q9BX46 236 aaKnown RBP14.42□□□□□ -0.1
TUBB3-213ENST00000557262 STMN4Q9H169 189 aaPredicted RBP14.42□□□□□ -0.1
TUBB3-213ENST00000557262 ACBD3Q9H3P7 528 aa14.42□□□□□ -0.1
TUBB3-213ENST00000557262 DCDC2Q9UHG0 476 aa14.42□□□□□ -0.1
TUBB3-213ENST00000557262 FBXL2Q9UKC9 423 aa14.42□□□□□ -0.1
TUBB3-213ENST00000557262 NF1P21359 2839 aa14.42□□□□□ -0.1
TUBB3-213ENST00000557262 MYO1GB0I1T2 1018 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 PLOD2O00469 737 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 ZIC3O60481 467 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 GOSR1O95249 250 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 PYGBP11216 843 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 KLK2P20151 261 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 DDCP20711 480 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 GRK2P25098 689 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 DPP4P27487 766 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 LHX2P50458 406 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 GAS1P54826 345 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 PPP2R2AP63151 447 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 C2orf80Q0P641 193 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 SLC29A2Q14542 456 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 SPDYAQ5MJ70 313 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 OR7G2Q8NG99 324 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 OR4N2Q8NGD1 307 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 RNF138Q8WVD3 245 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 MBD6Q96DN6 1003 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 SFXN2Q96NB2 322 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 ALPK1Q96QP1 1244 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 KCNA7Q96RP8 456 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 G6PC3Q9BUM1 346 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 PIGMQ9H3S5 423 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 MID1IP1Q9NPA3 183 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 SENP1Q9P0U3 644 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 CLCF1Q9UBD9 225 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 DKKL1Q9UK85 242 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 OR10H1Q9Y4A9 318 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 ABCA4P78363 2273 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 DOCK7Q96N67 2140 aa14.41□□□□□ -0.1
TUBB3-213ENST00000557262 ZNF469Q96JG9 3925 aaPredicted RBP14.4□□□□□ -0.1
TUBB3-213ENST00000557262 MED12Q93074 2177 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 A0A087WV62 115 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 ZNF708P17019 499 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 CLDN18P56856 261 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 PSG6Q00889 435 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 BCL2A1Q16548 175 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 LUZP2Q86TE4 346 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 CCNYL1Q8N7R7 359 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 EFHD2Q96C19 240 aaPredicted RBP14.4□□□□□ -0.1
TUBB3-213ENST00000557262 CCDC126Q96EE4 140 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 DACH2Q96NX9 599 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 YIPF4Q9BSR8 244 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 EBPLQ9BY08 206 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 GSTO2Q9H4Y5 243 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 TAS2R7Q9NYW3 318 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 GRID1Q9ULK0 1009 aa14.4□□□□□ -0.1
TUBB3-213ENST00000557262 WBP11Q9Y2W2 641 aaKnown RBP14.4□□□□□ -0.1
TUBB3-213ENST00000557262 HRNRQ86YZ3 2850 aaPredicted RBP14.4□□□□□ -0.1
TUBB3-213ENST00000557262 A8MXE2 369 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 UBFD1O14562 309 aaKnown RBP14.39□□□□□ -0.11
TUBB3-213ENST00000557262 DIAPH2O60879 1101 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 COQ9O75208 318 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 SLITRK5O94991 958 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 RAF1P04049 648 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 CPA2P48052 419 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 DIO3P55073 304 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 FOXA1P55317 472 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 DSCR4P56555 118 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-213ENST00000557262 NAA20P61599 178 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 ZNF763Q0D2J5 394 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 PRSS53Q2L4Q9 553 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 CYP27C1Q4G0S4 372 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 FAM71E1Q6IPT2 247 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 PLXDC2Q6UX71 529 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 PAMR1Q6UXH9 720 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 CHMP1BQ7LBR1 199 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 GRAMD2AQ8IUY3 354 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 OR4K17Q8NGC6 315 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.39□□□□□ -0.11
TUBB3-213ENST00000557262 DSN1Q9H410 356 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 PLEKHF2Q9H8W4 249 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 MIEF1Q9NQG6 463 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 SDHAF3Q9NRP4 125 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 GALNT8Q9NY28 637 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 PPP4R1LQ9P1A2 415 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 PSMC3IPQ9P2W1 217 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-213ENST00000557262 TBK1Q9UHD2 729 aa14.39□□□□□ -0.11
TUBB3-213ENST00000557262 C19orf53Q9UNZ5 99 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-213ENST00000557262 RPH3AQ9Y2J0 694 aaPredicted RBP14.39□□□□□ -0.11
TUBB3-213ENST00000557262 G3V2L1 256 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 H3BQF6 201 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 HCRTR2O43614 444 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 FADS1O60427 444 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 TGM6O95932 706 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 JUNP05412 331 aaKnown RBP14.38□□□□□ -0.11
TUBB3-213ENST00000557262 FAM153BP0C7A2 387 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 MYL2P10916 166 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 PEPDP12955 493 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms