RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 FIG4Q92562 907 aa10.72□□□□□ -0.69
ACTN1-221ENST00000556571 ATP6V1E2Q96A05 226 aa10.72□□□□□ -0.69
ACTN1-221ENST00000556571 FRG2BQ96QU4 278 aa10.72□□□□□ -0.69
ACTN1-221ENST00000556571 ADOQ96SZ5 270 aa10.72□□□□□ -0.69
ACTN1-221ENST00000556571 MRPL1Q9BYD6 325 aaKnown RBP10.72□□□□□ -0.69
ACTN1-221ENST00000556571 TSPYL1Q9H0U9 437 aa10.72□□□□□ -0.69
ACTN1-221ENST00000556571 PROCRQ9UNN8 238 aa10.72□□□□□ -0.69
ACTN1-221ENST00000556571 ZNF175Q9Y473 711 aa10.72□□□□□ -0.69
ACTN1-221ENST00000556571 EXPH5Q8NEV8 1989 aa10.72□□□□□ -0.69
ACTN1-221ENST00000556571 RNF212BA8MTL3 300 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 LINC01387J3KSC0 135 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 KLF4O43474 513 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 BCAS2O75934 225 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-221ENST00000556571 IFNA2P01563 188 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 PPP3CBP16298 524 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 TCEA1P23193 301 aaKnown RBP10.71□□□□□ -0.69
ACTN1-221ENST00000556571 GRK2P25098 689 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 KRT20P35900 424 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 ARL1P40616 181 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-221ENST00000556571 NR1H2P55055 460 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 KRTAP1-1Q07627 177 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 DMTNQ08495 405 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 TNK1Q13470 666 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 CAPRIN1Q14444 709 aaKnown RBP10.71□□□□□ -0.69
ACTN1-221ENST00000556571 ACAP2Q15057 778 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 ANKRD34AQ69YU3 496 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 TTC19Q6DKK2 380 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-221ENST00000556571 ZNF704Q6ZNC4 412 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-221ENST00000556571 C22orf34Q6ZV56 151 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 MILR1Q7Z6M3 343 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 METTL4Q8N3J2 472 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 PPM1NQ8N819 430 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 OR4K17Q8NGC6 315 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 KCTD4Q8WVF5 259 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 BTBD9Q96Q07 612 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 KLHL4Q9C0H6 718 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 NOL11Q9H8H0 719 aaKnown RBP10.71□□□□□ -0.69
ACTN1-221ENST00000556571 RNF122Q9H9V4 155 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 ZNF780BQ9Y6R6 833 aa10.71□□□□□ -0.69
ACTN1-221ENST00000556571 A0A087X1B8 175 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-221ENST00000556571 TSPAN2O60636 221 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 SOX30O94993 753 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 PCSK2P16519 638 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 PHBP35232 272 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 PNLIPRP2P54317 469 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 GAS1P54826 345 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 CLDN15P56746 228 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 MRPS22P82650 360 aaKnown RBP10.7□□□□□ -0.7
ACTN1-221ENST00000556571 MRPS35P82673 323 aaKnown RBP10.7□□□□□ -0.7
ACTN1-221ENST00000556571 OCRLQ01968 901 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 IFT88Q13099 833 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 TRADDQ15628 312 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 HMBOX1Q6NT76 420 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 PODNL1Q6PEZ8 512 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 ZDHHC24Q6UX98 284 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 LARP4Q71RC2 724 aaKnown RBP eCLIP10.7□□□□□ -0.7
ACTN1-221ENST00000556571 FAM214BQ7L5A3 538 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 COMMD6Q7Z4G1 85 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 CENPLQ8N0S6 344 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-221ENST00000556571 ZNF611Q8N823 705 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 NOA1Q8NC60 698 aaKnown RBP10.7□□□□□ -0.7
ACTN1-221ENST00000556571 RNF138Q8WVD3 245 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 TM4SF18Q96CE8 201 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 KLHL29Q96CT2 875 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 ERP27Q96DN0 273 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 NTMT1Q9BV86 223 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 FAIM2Q9BWQ8 316 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 PINK1Q9BXM7 581 aa10.7□□□□□ -0.7
ACTN1-221ENST00000556571 CHD3Q12873 2000 aaKnown RBP10.7□□□□□ -0.7
ACTN1-221ENST00000556571 OR7A17O14581 309 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 HS3ST1O14792 307 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 SIX3O95343 332 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-221ENST00000556571 ALDOAP04075 364 aaKnown RBP10.69□□□□□ -0.7
ACTN1-221ENST00000556571 TP53P04637 393 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-221ENST00000556571 C2P06681 752 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 THBDP07204 575 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 CT45A8P0DMV1 189 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 CT45A9P0DMV2 189 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 NID1P14543 1247 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 HK1P19367 917 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 IL12BP29460 328 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 CCNG1P51959 295 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 SUCLG1P53597 346 aaKnown RBP10.69□□□□□ -0.7
ACTN1-221ENST00000556571 RPS3AP61247 264 aaKnown RBP10.69□□□□□ -0.7
ACTN1-221ENST00000556571 IRF9Q00978 393 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 DUSP2Q05923 314 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 PON3Q15166 354 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 GUSBP1Q15486 140 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 LTB4RQ15722 352 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 ETFDHQ16134 617 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 CLEC12BQ2HXU8 276 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 EXOC3L2Q2M3D2 409 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 CT45A2Q5DJT8 189 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 RAET1LQ5VY80 246 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 KLC3Q6P597 504 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 FADS6Q8N9I5 356 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 OR52B6Q8NGF0 335 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 FNDC9Q8TBE3 224 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms