RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 AAGABQ6PD74 315 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 ZYG11AQ6WRX3 759 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 CDC20BQ86Y33 519 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 OR4N2Q8NGD1 307 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 LINC01560Q8TB33 94 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 EFHD2Q96C19 240 aaPredicted RBP20.52■□□□□ 0.88
ACTN1-220ENST00000556433 DTNBP1Q96EV8 351 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 RMND5BQ96G75 393 aaPredicted RBP20.52■□□□□ 0.88
ACTN1-220ENST00000556433 FOXC2Q99958 501 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 SHCBP1LQ9BZQ2 653 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 JKAMPQ9P055 326 aa20.52■□□□□ 0.88
ACTN1-220ENST00000556433 PRRC2AP48634 2157 aaKnown RBP20.52■□□□□ 0.88
ACTN1-220ENST00000556433 MYO1GB0I1T2 1018 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 CRCPO75575 148 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 RCBTB2O95199 551 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 JUNP05412 331 aaKnown RBP20.51■□□□□ 0.87
ACTN1-220ENST00000556433 EPXP11678 715 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 GRK2P25098 689 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 NCBP2P52298 156 aaKnown RBP eCLIP20.51■□□□□ 0.87
ACTN1-220ENST00000556433 MRPS22P82650 360 aaKnown RBP20.51■□□□□ 0.87
ACTN1-220ENST00000556433 ZNF763Q0D2J5 394 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 WNT2BQ93097 391 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 SFXN2Q96NB2 322 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 TM9SF2Q99805 663 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 DKKL1Q9UK85 242 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 EDARQ9UNE0 448 aa20.51■□□□□ 0.87
ACTN1-220ENST00000556433 MRPS18CQ9Y3D5 142 aaKnown RBP20.51■□□□□ 0.87
ACTN1-220ENST00000556433 DOCK7Q96N67 2140 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 CLCA1A8K7I4 914 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 ZIC3O60481 467 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 COQ9O75208 318 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 GLRA3O75311 464 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 TCEA1P23193 301 aaKnown RBP20.5■□□□□ 0.87
ACTN1-220ENST00000556433 LHX2P50458 406 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 ZNF155Q12901 538 aaPredicted RBP20.5■□□□□ 0.87
ACTN1-220ENST00000556433 SH2D4BQ5SQS7 431 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 FBXW10Q5XX13 1052 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 FAM71E1Q6IPT2 247 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 PLXDC2Q6UX71 529 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 ADGRE4PQ86SQ3 457 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 RNF138Q8WVD3 245 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 INTS12Q96CB8 462 aaKnown RBP20.5■□□□□ 0.87
ACTN1-220ENST00000556433 ZFP3Q96NJ6 502 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 UCN2Q96RP3 112 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 SFXN3Q9BWM7 321 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 MIEF1Q9NQG6 463 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 GRID1Q9ULK0 1009 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 PLEKHA6Q9Y2H5 1048 aa20.5■□□□□ 0.87
ACTN1-220ENST00000556433 RPH3AQ9Y2J0 694 aaPredicted RBP20.5■□□□□ 0.87
ACTN1-220ENST00000556433 POLR3HQ9Y535 204 aaPredicted RBP20.5■□□□□ 0.87
ACTN1-220ENST00000556433 A0A087WV62 115 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 PLOD2O00469 737 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 PROCP04070 461 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 DNASE1P24855 282 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 DPP4P27487 766 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 MC3RP41968 323 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 GAS1P54826 345 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 NAA20P61599 178 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 SORDQ00796 357 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 PSG6Q00889 435 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 CFAP157Q5JU67 520 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 TRIM46Q7Z4K8 759 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 OR4K17Q8NGC6 315 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.49■□□□□ 0.87
ACTN1-220ENST00000556433 G6PC3Q9BUM1 346 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 RBM24Q9BX46 236 aaKnown RBP20.49■□□□□ 0.87
ACTN1-220ENST00000556433 CXXC4Q9H2H0 198 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 MYNNQ9NPC7 610 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 TAS2R7Q9NYW3 318 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 C19orf53Q9UNZ5 99 aaPredicted RBP20.49■□□□□ 0.87
ACTN1-220ENST00000556433 WBP11Q9Y2W2 641 aaKnown RBP20.49■□□□□ 0.87
ACTN1-220ENST00000556433 MTORP42345 2549 aa20.49■□□□□ 0.87
ACTN1-220ENST00000556433 H3BQF6 201 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 CHMP24386 653 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 CCT5P48643 541 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 CLDN18P56856 261 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 TMEM107Q6UX40 140 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 FRMD7Q6ZUT3 714 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 SH2D5Q6ZV89 423 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 LUZP2Q86TE4 346 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 GSPT2Q8IYD1 628 aaKnown RBP20.48■□□□□ 0.87
ACTN1-220ENST00000556433 FAM76AQ8TAV0 307 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 DSN1Q9H410 356 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 RRAGDQ9NQL2 400 aaPredicted RBP20.48■□□□□ 0.87
ACTN1-220ENST00000556433 PPP4R1LQ9P1A2 415 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 CLCF1Q9UBD9 225 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 ABCA4P78363 2273 aa20.48■□□□□ 0.87
ACTN1-220ENST00000556433 C17orf51A8MQB3 221 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 B4DXG7 233 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 SCO2O43819 266 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 SLITRK5O94991 958 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 CD99P14209 185 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 ZNF708P17019 499 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 NTSP30990 170 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 EVI2BP34910 448 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 DSCR4P56555 118 aaPredicted RBP20.47■□□□□ 0.87
ACTN1-220ENST00000556433 DNAJB13P59910 316 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 GAB1Q13480 694 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 CCDC153Q494R4 210 aa20.47■□□□□ 0.87
ACTN1-220ENST00000556433 CYP27C1Q4G0S4 372 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms