RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TREX2Q9BQ50 279 aaPredicted RBP14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 B3GNT4Q9C0J1 378 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 PELI2Q9HAT8 420 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF860A6NHJ4 632 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 SNAPC5O75971 98 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 KRT33AO76009 404 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 HOXC5Q00444 222 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 ENPP7Q6UWV6 458 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 ARL6Q9H0F7 186 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 GABRPO00591 440 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 CASC3O15234 703 aaKnown RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 LRRTM2O43300 516 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 GABRA5P31644 462 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 LCTLQ6UWM7 567 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 GRASPQ7Z6J2 395 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 LRRC25Q8N386 305 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 INO80EQ8NBZ0 244 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 THEM6Q8WUY1 208 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 DPH1Q9BZG8 443 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 NT5DC2Q9H857 520 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC6A13Q9NSD5 602 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 MSRAQ9UJ68 235 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 C5orf51A6NDU8 294 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 FOXE1O00358 373 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 CREBL2O60519 120 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 GPX5O75715 221 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 ERVK-21P61565 698 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 PSPHP78330 225 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 POU6F2P78424 691 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 SMCO1Q147U7 214 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 PIP5KL1Q5T9C9 394 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 GAL3ST4Q96RP7 486 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 ACTL8Q9H568 366 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 NUP50Q9UKX7 468 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 GRXCR1A8MXD5 290 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 PAHP00439 452 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 FNTBP49356 437 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 GRIN2CQ14957 1233 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 POU4F3Q15319 338 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 SWI5Q1ZZU3 235 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 FLYWCH1Q4VC44 716 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 MPP7Q5T2T1 576 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 FAM205BPQ63HN1 556 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZCCHC12Q6PEW1 402 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 KLHL24Q6TFL4 600 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF852Q6ZMS4 543 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLCO4C1Q6ZQN7 724 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC9B2Q86UD5 537 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 RASGEF1AQ8N9B8 481 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR8S1Q8NH09 359 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 COQ10AQ96MF6 247 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 C5orf34Q96MH7 638 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 FYTTD1Q96QD9 318 aaKnown RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 GPER1Q99527 375 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 PIGUQ9H490 435 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 RASD1Q9Y272 281 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 SBF2Q86WG5 1849 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 A0A1B0GVI7 797 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 RBBP9O75884 186 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 ELAVL4P26378 380 aaKnown RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 MLLT3P42568 568 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 PRLHRP49683 370 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 FAHD1Q6P587 224 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 ARMC10Q8N2F6 343 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 NEDD4LQ96PU5 975 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 TRIM2Q9C040 744 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 TMEM38AQ9H6F2 299 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC7A7Q9UM01 511 aa14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 DIMT1Q9UNQ2 313 aaKnown RBP14.19□□□□□ -0.14
ARHGEF40-207ENST00000556399 FMO6PO60774 539 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 SPNP16150 400 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 PRKACBP22694 351 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 MRPL19P49406 292 aaKnown RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 POU4F2Q12837 409 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 FAPQ12884 760 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 MINDY4Q4G0A6 757 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 C3orf38Q5JPI3 329 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 FBXO15Q8NCQ5 510 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF582Q96NG8 517 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZIC5Q96T25 663 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CLSTN3Q9BQT9 956 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 INIPQ9NRY2 104 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 FAM183AA6NL82 134 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 POLR1CO15160 346 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CD3GP09693 182 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 GABRA3P34903 492 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 ACTA2P62736 377 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 ACTG2P63267 376 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 NKX3-2P78367 333 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 IL20RBQ6UXL0 311 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 QSOX2Q6ZRP7 698 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 POLDIP3Q9BY77 421 aaKnown RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 HOXD1Q9GZZ0 328 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CXorf36Q9H7Y0 433 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 NOP16Q9Y3C1 178 aaKnown RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 DEFB134Q4QY38 66 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLX4IPQ5VYV7 408 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 METAP1DQ6UB28 335 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 PTOV1Q86YD1 416 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR4N5Q8IXE1 308 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms