RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 G3V3Y1 287 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 RNASET2O00584 256 aaKnown RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 EDF1O60869 148 aaKnown RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 DIAPH2O60879 1101 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 UGT2B11O75310 529 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 TRIM3O75382 744 aaPredicted RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 NKX2-2O95096 273 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 C6orf47O95873 294 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 P04436 131 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 IDO1P14902 403 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 RFC3P40938 356 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 PTGDSP41222 190 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 CASP3P42574 277 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 DNASE1L1P49184 302 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 MRPL19P49406 292 aaKnown RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 HBA1P69905 142 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 PSPHP78330 225 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 SRSF1Q07955 248 aaKnown RBP eCLIP8.85□□□□□ -0.99
SRP54-210ENST00000556380 GSTA3Q16772 222 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 PGS1Q32NB8 556 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 CYP27C1Q4G0S4 372 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 PDCD4Q53EL6 469 aaKnown RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 SPANXN4Q5MJ08 99 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 BICRALQ6AI39 1079 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 OR4F3Q6IEY1 312 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 MFSD12Q6NUT3 480 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 ZCCHC12Q6PEW1 402 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 WDR53Q7Z5U6 358 aaPredicted RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 SLC44A2Q8IWA5 706 aaPredicted RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 CLECL1Q8IZS7 167 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 FAM98AQ8NCA5 519 aaKnown RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 NUP43Q8NFH3 380 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 OR5M3Q8NGP4 307 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 FAM110BQ8TC76 370 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 STON2Q8WXE9 905 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 TMBIM1Q969X1 311 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 C16orf58Q96GQ5 468 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 GPR137Q96N19 417 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 COL21A1Q96P44 957 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 NODALQ96S42 347 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 FAM173AQ9BQD7 235 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 EBF4Q9BQW3 602 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 CCDC28BQ9BUN5 200 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 ANGPTL4Q9BY76 406 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 C3orf14Q9HBI5 128 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 SDR39U1Q9NRG7 319 aaPredicted RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 GPATCH2Q9NW75 528 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 TUBA8Q9NY65 449 aaPredicted RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 VPS4AQ9UN37 437 aa8.85□□□□□ -0.99
SRP54-210ENST00000556380 SETXQ7Z333 2677 aaKnown RBP8.85□□□□□ -0.99
SRP54-210ENST00000556380 GXYLT2A0PJZ3 443 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ANKUB1A6NFN9 424 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 LRRC3CA6NJW4 275 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 E9PBE3 544 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 TP53I11O14683 189 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 UBDO15205 165 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ASNA1O43681 348 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 IL33O95760 270 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 IGKV1D-16P01601 117 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ACP2P11117 423 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 GABRA3P34903 492 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 KIR3DL1P43629 444 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 CCT3P49368 545 aaKnown RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 MAN2A2P49641 1150 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 TMED10P49755 219 aaKnown RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 DGKQP52824 942 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 CLNS1AP54105 237 aaKnown RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 PNLIPRP2P54317 469 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 PRKAG1P54619 331 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 AQP5P55064 265 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 NME5P56597 212 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 PPIAP62937 165 aaKnown RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 ALDH6A1Q02252 535 aaKnown RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 PLCXD2Q0VAA5 305 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ZNF155Q12901 538 aaPredicted RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 DPY19L1Q2PZI1 675 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 EIF2S3LQ2VIR3 472 aaKnown RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 FAM174BQ3ZCQ3 159 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 KRTCAP3Q53RY4 240 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 CMPK2Q5EBM0 449 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ANXA8L1Q5VT79 327 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 FNDC7Q5VTL7 733 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 NXNQ6DKJ4 435 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 BNC2Q6ZN30 1099 aaPredicted RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 FGD2Q7Z6J4 655 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 TMEM251Q8N6I4 163 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 CDRT4Q8N9R6 151 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 GLB1L3Q8NCI6 653 aaPredicted RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 SLC16A11Q8NCK7 471 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 OR52N2Q8NGI0 321 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 GOT1L1Q8NHS2 421 aaPredicted RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 SFXN5Q8TD22 340 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 DIO2Q92813 273 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 MARK4Q96L34 752 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 CCDC115Q96NT0 180 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ADOQ96SZ5 270 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 TTTY12Q9BZ98 90 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 CCDC134Q9H6E4 229 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ZDHHC11Q9H8X9 412 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms