RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MYO1HQ8N1T3 1032 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 OR2L5Q8NG80 312 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 SMAP2Q8WU79 429 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ANKRD7Q92527 254 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 PPWD1Q96BP3 646 aaKnown RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 FBXL8Q96CD0 374 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ZMYND19Q96E35 227 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 FBXL20Q96IG2 436 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF845Q96IR2 970 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 HS6ST2Q96MM7 605 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 DGAT2Q96PD7 388 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 GAL3ST4Q96RP7 486 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 NAPGQ99747 312 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 REXO4Q9GZR2 422 aaKnown RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 WWTR1Q9GZV5 400 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 FBXO6Q9NRD1 293 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 SYBUQ9NX95 663 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 PAK5Q9P286 719 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 HEY2Q9UBP5 337 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 TRMT6Q9UJA5 497 aaKnown RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 DTX4Q9Y2E6 619 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 MAGED1Q9Y5V3 778 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 KCNE2Q9Y6J6 123 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 A0A0G2JK05 382 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 SERINC4A6NH21 518 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 OR6C76A6NM76 312 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 C22orf46C9J442 243 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 CDC7O00311 574 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 LIASO43766 372 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 SSX4O60224 188 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 FGF17O60258 216 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 H2AFYO75367 372 aaKnown RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 CBR3O75828 277 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 PLATP00750 562 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 ZSCAN5DPP0CG00 497 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 IGHV4-31P0DP07 118 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 ZNF708P17019 499 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 IGFBP5P24593 272 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 GSTM2P28161 218 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 CASQ1P31415 396 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 HPDP32754 393 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 CLDN18P56856 261 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 SLC37A1P57057 533 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 HERVK_113P63132 956 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 ERVK-8P63133 956 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 SIRPAP78324 504 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 KIF5AQ12840 1032 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 THOC5Q13769 683 aaKnown RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 FGFBP1Q14512 234 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 ZNF267Q14586 743 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 SPA17Q15506 151 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 BCL2A1Q16548 175 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 FAM174BQ3ZCQ3 159 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 KBTBD12Q3ZCT8 623 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 FAM120AOSQ5T036 256 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 MROH9Q5TGP6 573 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 GTF2IRD2BQ6EKJ0 949 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 TRIM40Q6P9F5 258 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 AAGABQ6PD74 315 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 CD300LDQ6UXZ3 194 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 CHMP1BQ7LBR1 199 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 GTF2IRD2Q86UP8 949 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 GSPT2Q8IYD1 628 aaKnown RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 RNF10Q8N5U6 811 aaKnown RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 RFLNBQ8N5W9 214 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 FAM169BQ8N8A8 192 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 OR14L1PQ8NHC6 308 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 RAB3IL1Q8TBN0 382 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 DOK4Q8TEW6 326 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 ATG4AQ8WYN0 398 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 CCT6BQ92526 530 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 FBXW5Q969U6 566 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 C11orf24Q96F05 449 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 C1orf159Q96HA4 380 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 MAPKAP1Q9BPZ7 522 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 ERVK-6Q9BXR3 956 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 TRIM54Q9BYV2 358 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 OR2B2Q9GZK3 357 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 COPS7BQ9H9Q2 264 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 SNX15Q9NRS6 342 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 PROCRQ9UNN8 238 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 EXO1Q9UQ84 846 aaKnown RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 ERVK-19Q9WJR5 959 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 SLC22A14Q9Y267 594 aa6.14□□□□□ -1.43
ATXN3-236ENST00000556220 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
ATXN3-236ENST00000556220 UQCRHLA0A096LP55 91 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 C2orf92A0A1B0GVN3 265 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 PABPN1LA6NDY0 278 aaKnown RBP6.13□□□□□ -1.43
ATXN3-236ENST00000556220 SLC22A20A6NK97 555 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 TCF21O43680 179 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 HAUS5O94927 633 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 GUCA1CO95843 209 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 CD8AP01732 235 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 CLPSP04118 112 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 ABCB1P08183 1280 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-236ENST00000556220 RHOXF2BP0C7M4 288 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 C1GALT1C1LP0DN25 315 aa6.13□□□□□ -1.43
ATXN3-236ENST00000556220 ALOX15P16050 662 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-236ENST00000556220 H2AFXP16104 143 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-236ENST00000556220 SLC1A2P43004 574 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms