RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ANKRD9Q96BM1 317 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 PPWD1Q96BP3 646 aaKnown RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 CERS2Q96G23 380 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 CFAP36Q96G28 342 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 PDLIM5Q96HC4 596 aaKnown RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 SENP5Q96HI0 755 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 CLPTM1LQ96KA5 538 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 ART5Q96L15 291 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 DACH2Q96NX9 599 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 F2RL3Q96RI0 385 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 KRT12Q99456 494 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 PRPF18Q99633 342 aaKnown RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 FOXB1Q99853 325 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 MAPKAP1Q9BPZ7 522 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 WDR83Q9BRX9 315 aaKnown RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 BDH2Q9BUT1 245 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 RBM24Q9BX46 236 aaKnown RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 ROGDIQ9GZN7 287 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 NT5DC2Q9H857 520 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 GRPEL1Q9HAV7 217 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 PROK2Q9HC23 129 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 LYRM4Q9HD34 91 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 LZTFL1Q9NQ48 299 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 PRDM7Q9NQW5 492 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 GALNT8Q9NY28 637 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 RPS6KA6Q9UK32 745 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 CNOT11Q9UKZ1 510 aaKnown RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 CORO1CQ9ULV4 474 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 EIF3LQ9Y262 564 aaKnown RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 VWA7Q9Y334 891 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 SLC6A5Q9Y345 797 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 OARD1Q9Y530 152 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 CHCHD2Q9Y6H1 151 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 RAI1Q7Z5J4 1906 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-220ENST00000556164 TLN2Q9Y4G6 2542 aa5.32□□□□□ -1.56
PRKCH-220ENST00000556164 IQANK1A0A1B0GTG1 560 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 MBD3L4A6NDZ8 208 aaPredicted RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 MBD3L3A6NE82 208 aaPredicted RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 MBD3L5A6NJ08 208 aaPredicted RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 CD8B2A6NJW9 211 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 AP3D1O14617 1153 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 TP53I11O14683 189 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 OR10H2O60403 315 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 TRIM3O75382 744 aaPredicted RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ACSL3O95573 720 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 IL18BPO95998 194 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 IGKV3-11P04433 115 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 BMP7P18075 431 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ATP5A1P25705 553 aaKnown RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ARL3P36405 182 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 CPOXP36551 454 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 SSR2P43308 183 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 MAP2K3P46734 347 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 CDK9P50750 372 aaKnown RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 PCBP3P57721 371 aaKnown RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 FBXW4P57775 412 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 HERVK_113P63132 956 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ERVK-8P63133 956 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ROM1Q03395 351 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 RCAN2Q14206 197 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 TSNQ15631 228 aaKnown RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 NTRK2Q16620 822 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 EIPR1Q53HC9 387 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 FBXO48Q5FWF7 155 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 DCST1Q5T197 706 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 SFRP5Q5T4F7 317 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 TEDDM1Q5T9Z0 273 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 BICRALQ6AI39 1079 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 GPR139Q6DWJ6 353 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 VASNQ6EMK4 673 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 TMEM64Q6YI46 380 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 RNF111Q6ZNA4 994 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 DGAT2L6Q6ZPD8 337 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 RAPH1Q70E73 1250 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 R3HCC1LQ7Z5L2 792 aaKnown RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ADAMTSL2Q86TH1 951 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 TAGAPQ8N103 731 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 OR8H3Q8N146 312 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 LRRC75A-AS1Q8N1F1 130 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 CDYL2Q8N8U2 506 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ACOT4Q8N9L9 421 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 C9orf106Q8NAJ2 232 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 SRFBP1Q8NEF9 429 aaKnown RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 MBD3L2Q8NHZ7 208 aaPredicted RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 MGARPQ8TDB4 240 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 SMPDL3BQ92485 455 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ABTB1Q969K4 478 aaPredicted RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 PIGTQ969N2 578 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 RHBDF1Q96CC6 855 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 RNF125Q96EQ8 232 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 PERPQ96FX8 193 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 RBM18Q96H35 190 aaKnown RBP5.31□□□□□ -1.56
PRKCH-220ENST00000556164 WDYHV1Q96HA8 205 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 FBXL20Q96IG2 436 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 RILPQ96NA2 401 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 GNRHR2Q96P88 292 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 CCL19Q99731 98 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 TBCDQ9BTW9 1192 aa5.31□□□□□ -1.56
PRKCH-220ENST00000556164 ERVK-6Q9BXR3 956 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms