RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 OR51I1Q9H343 314 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TRIM45Q9H8W5 580 aaPredicted RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 LIN28AQ9H9Z2 209 aaKnown RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 IL1RL2Q9HB29 575 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CACYBPQ9HB71 228 aaKnown RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 GPATCH2Q9NW75 528 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 NDE1Q9NXR1 346 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CNIH4Q9P003 139 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TAGLN3Q9UI15 199 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CBLCQ9ULV8 474 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TP53TG5Q9Y2B4 290 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 DTX4Q9Y2E6 619 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 GMEB1Q9Y692 573 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TNRC6AQ8NDV7 1962 aaKnown RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 SVILO95425 2214 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 FAM208BQ5VWN6 2430 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 OR6C70A6NIJ9 312 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 FBP2O00757 339 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 OR6B1O95007 311 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 NADKO95544 446 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 IL33O95760 270 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 P04436 131 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 OR12D1P0DN82 309 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 ACP2P11117 423 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 ESRRAP11474 423 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 HPGDP15428 266 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 PTPN6P29350 595 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 PIGAP37287 484 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 CD96P40200 585 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 MAP3K8P41279 467 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 RFX3P48380 749 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 NUDT2P50583 147 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 DSTNP60981 165 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 RPS26P62854 115 aaKnown RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 MXRA7P84157 204 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 TUBA3CQ13748 450 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 RGNQ15493 299 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 OR1C1Q15619 314 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 DUSP5Q16690 384 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 ZNF791Q3KP31 576 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 GTDC1Q4AE62 458 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 RUNDC3AQ59EK9 446 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 EXOSC6Q5RKV6 272 aaKnown RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 SLC22A10Q63ZE4 541 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 SLC25A25Q6KCM7 469 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 TNFAIP8L2Q6P589 184 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 TUBA3EQ6PEY2 450 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 DLEU7Q6UYE1 221 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 NPSR1Q6W5P4 371 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 HACD2Q6Y1H2 254 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 C16orf47Q6ZP98 133 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 TRPM8Q7Z2W7 1104 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 WDR53Q7Z5U6 358 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 RETREG3Q86VR2 466 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 PRR22Q8IZ63 422 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 CLEC4FQ8N1N0 589 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 FITM2Q8N6M3 262 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 METTL25Q8N6Q8 603 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 AMER2Q8N7J2 671 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 BCORP1Q8N888 145 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 TEX19Q8NA77 164 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 FAM98AQ8NCA5 519 aaKnown RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 OR8J3Q8NGG0 315 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 FBXO30Q8TB52 745 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 PNPT1Q8TCS8 783 aaKnown RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 DIO2Q92813 273 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 CDS1Q92903 461 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 TMBIM1Q969X1 311 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 DTNBP1Q96EV8 351 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 RMND5BQ96G75 393 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 SLC35A4Q96G79 324 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 AURKBQ96GD4 344 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 NSL1Q96IY1 281 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 ANKRD27Q96NW4 1050 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 ADOQ96SZ5 270 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 NPAS2Q99743 824 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 HOPXQ9BPY8 73 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 HOXD1Q9GZZ0 328 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 SLC25A18Q9H1K4 315 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 ZBTB20Q9HC78 741 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 ZNF71Q9NQZ8 489 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 POLE3Q9NRF9 147 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 SACM1LQ9NTJ5 587 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 ANKRD10Q9NXR5 420 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 PLA2G3Q9NZ20 509 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 CALML5Q9NZT1 146 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 VAPAQ9P0L0 249 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 SLAMF8Q9P0V8 285 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 MAP10Q9P2G4 905 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 P2RX2Q9UBL9 471 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 B3GNT3Q9Y2A9 372 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 KLF13Q9Y2Y9 288 aaPredicted RBP7.04□□□□□ -1.28
TDP1-214ENST00000556063 L3MBTL1Q9Y468 752 aa7.04□□□□□ -1.28
TDP1-214ENST00000556063 ATRXP46100 2492 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 TRBV5-3A0A0A0MS03 114 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 GXYLT2A0PJZ3 443 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 CCT8L1PA6NM43 557 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 C5orf58C9J3I9 102 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 KLRC4-KLRK1H3BQV0 150 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 MAN1A2O60476 641 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms