RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 IFNGR1P15260 489 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CSNK2A2P19784 350 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 TLX1P31314 330 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 MPIP34949 423 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 BUD31P41223 144 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 FRKP42685 505 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CCT3P49368 545 aaKnown RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 NXPH1P58417 271 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 DSTNP60981 165 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 TXNL4AP83876 142 aaKnown RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CDK6Q00534 326 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 HSPB3Q12988 150 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 BLMHQ13867 455 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 SPIDRQ14159 915 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 PDK3Q15120 406 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 SFRP5Q5T4F7 317 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 SAXO2Q658L1 398 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 FCRL6Q6DN72 434 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF793Q6ZN11 406 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CBLL1Q75N03 491 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 RNF44Q7L0R7 432 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ABHD13Q7L211 337 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 EIF3MQ7L2H7 374 aaKnown RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF551Q7Z340 670 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 C6orf120Q7Z4R8 191 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 VN1R4Q7Z5H5 301 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 PATL1Q86TB9 770 aaKnown RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 TRIM73Q86UV7 250 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 RNF130Q86XS8 419 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ZDHHC13Q8IUH4 622 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ZDHHC21Q8IVQ6 265 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 SAMD14Q8IZD0 417 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CLEC4FQ8N1N0 589 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 C10orf111Q8N326 155 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ARL14Q8N4G2 192 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 MARVELD2Q8N4S9 558 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 METTL25Q8N6Q8 603 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 AMER3Q8N944 861 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 FAM110BQ8TC76 370 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 UTP15Q8TED0 518 aaKnown RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 FBLIM1Q8WUP2 373 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 LZICQ8WZA0 190 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 RSC1A1Q92681 617 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 N4BP2L2Q92802 583 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-204ENST00000555890 NEURL3Q96EH8 262 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 Q96M66 194 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 OR2A5Q96R48 311 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 SLC29A1Q99808 456 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 MACROD1Q9BQ69 325 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CCDC3Q9BQI4 270 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 OSBPL10Q9BXB5 764 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CHST8Q9H2A9 424 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 TMEM38AQ9H6F2 299 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 CXorf36Q9H7Y0 433 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 C3orf14Q9HBI5 128 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 TM9SF3Q9HD45 589 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 C1GALT1Q9NS00 363 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 MS4A12Q9NXJ0 267 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF639Q9UID6 485 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 PILRAQ9UKJ1 303 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 OAZ3Q9UMX2 235 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ERVK-11Q9UQG0 969 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ANGPT4Q9Y264 503 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF780BQ9Y6R6 833 aa6.39□□□□□ -1.39
SLIRP-204ENST00000555890 PCLOQ9Y6V0 5065 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 A0A1B0GVT2 93 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 A0A1W2PR48 441 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 C7orf72A4D263 438 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 LILRA5A6NI73 299 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 MYO1GB0I1T2 1018 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 LMO7DNF2Z398 122 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 G3V2T6 193 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 H0YGG7 62 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ACOX3O15254 700 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 PPM1DO15297 605 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 BCAT2O15382 392 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 PCDHGA12O60330 932 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 CTSVO60911 334 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 E2F6O75461 281 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ERAL1O75616 437 aaKnown RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 UBXN7O94888 489 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 AIFM1O95831 613 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 HPRP00739 348 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 MT-ND1P03886 318 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 EIF2S1P05198 315 aaKnown RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 FABP3P05413 133 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 LYNP07948 512 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 UBTFL6P0CB48 400 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF888P0CJ79 500 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-204ENST00000555890 SMIM10L1P0DMW3 83 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 NR2F6P10588 404 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ETFAP13804 333 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 TYRP1P17643 537 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 ALOX12P18054 663 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 CDH3P22223 829 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 CPN2P22792 545 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 CERS1P27544 350 aa6.38□□□□□ -1.39
SLIRP-204ENST00000555890 UQCRFS1P47985 274 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms