RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CXCR6O00574 342 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 TNFRSF21O75509 655 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 NKX2-2O95096 273 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 ALPPP05187 535 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 PRKAR1AP10644 381 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 ACP2P11117 423 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 PSMA4P25789 261 aaKnown RBP10.38□□□□□ -0.75
SHMT2-220ENST00000555634 LCN1P31025 176 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 EFNA3P52797 238 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 CEACAM7Q14002 265 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 EFR3AQ14156 821 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 LARS2Q15031 903 aaKnown RBP10.38□□□□□ -0.75
SHMT2-220ENST00000555634 ARHGAP11BQ3KRB8 267 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 FLYWCH1Q4VC44 716 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 DCAF10Q5QP82 559 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 FAM69BQ5VUD6 431 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 CCDC81Q6ZN84 652 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 ERMP1Q7Z2K6 904 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 GPR155Q7Z3F1 870 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 HPS6Q86YV9 775 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 C9orf40Q8IXQ3 194 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 ZZZ3Q8IYH5 903 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 SLC34A3Q8N130 599 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 EID3Q8N140 333 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 SLC15A4Q8N697 577 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 SLC16A11Q8NCK7 471 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 APCDD1LQ8NCL9 501 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 OIT3Q8WWZ8 545 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 ASB15Q8WXK1 588 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 PMM1Q92871 262 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 RAB8BQ92930 207 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 OTUB1Q96FW1 271 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-220ENST00000555634 C16orf58Q96GQ5 468 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 TMEM19Q96HH6 336 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 WDR77Q9BQA1 342 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-220ENST00000555634 TRIM4Q9C037 500 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 HOXD1Q9GZZ0 328 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 KLHL28Q9NXS3 571 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 ACTR3BQ9P1U1 418 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 SEC14L3Q9UDX4 400 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 AHCTF1Q8WYP5 2266 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 CHD8Q9HCK8 2581 aa10.38□□□□□ -0.75
SHMT2-220ENST00000555634 A0A0G2JPF8 293 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 TMEM8BA6NDV4 472 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 HNRNPCL2B2RXH8 293 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 HNRNPCL3B7ZW38 293 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 H3BNH8 94 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 SCDO00767 359 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 TP53I11O14683 189 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ARPC2O15144 300 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 H6PDO95479 791 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 HNRNPCL4P0DMR1 293 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 GGT1P19440 569 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ENDOUP21128 410 aaKnown RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 S1PR1P21453 382 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 F8A1P23610 371 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 SOX11P35716 441 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 PIGAP37287 484 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 NR0B1P51843 470 aaKnown RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 TMPRSS3P57727 454 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 CORO7P57737 925 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 KCNJ2P63252 427 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 PSG6Q00889 435 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ELOAQ14241 798 aaKnown RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ABHD17BQ5VST6 288 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 OPN5Q6U736 354 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 LRRC74BQ6ZQY2 392 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 WDR53Q7Z5U6 358 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 SPATA24Q86W54 205 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 CALHM3Q86XJ0 350 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 PTRH1Q86Y79 214 aaKnown RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ARMC8Q8IUR7 673 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF619Q8N2I2 560 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 TMEM156Q8N614 296 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 NFAM1Q8NET5 270 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ELP5Q8TE02 316 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ADAMTS17Q8TE56 1095 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 SLC38A5Q8WUX1 472 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 MAL2Q969L2 176 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 DTNBP1Q96EV8 351 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 THOC3Q96J01 351 aaKnown RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 CLPTM1LQ96KA5 538 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF354BQ96LW1 612 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF583Q96ND8 569 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 DCBLD2Q96PD2 775 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 TREX2Q9BQ50 279 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 LHPPQ9H008 270 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 YY1AP1Q9H869 796 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 EGFL7Q9UHF1 273 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 SLC7A8Q9UHI5 535 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 WASF3Q9UPY6 502 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 GPR55Q9Y2T6 319 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-220ENST00000555634 IFT52Q9Y366 437 aa10.37□□□□□ -0.75
SHMT2-220ENST00000555634 ARGFXA6NJG6 315 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 A8MUI8 341 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 CDK2AP1O14519 115 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 REM1O75628 298 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF682O95780 498 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 DBIP07108 87 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms