RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 CLCNKAP51800 687 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 KHDRBS2Q5VWX1 349 aaKnown RBP16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 TTC23LQ6PF05 361 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 HTR3DQ70Z44 454 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 APOBEC4Q8WW27 367 aaKnown RBP16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 SAMD8Q96LT4 415 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 C12orf66Q96MD2 445 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 ZNF558Q96NG5 402 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 TEFMQ96QE5 360 aaKnown RBP16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 ATF6BQ99941 703 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 CHST2Q9Y4C5 530 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 BACE2Q9Y5Z0 518 aa16.03■□□□□ 0.16
PPP4R3A-208ENST00000555462 A0A0A6YYJ9 748 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 NUPL2O15504 423 aaKnown RBP16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 ALDH1A1P00352 501 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 IL1AP01583 271 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 CPEP16870 476 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 HSD3B2P26439 372 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 IRS1P35568 1242 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 SLC1A3P43003 542 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 SNRPNP63162 240 aaKnown RBP16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 ABATP80404 500 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 ZNF311Q5JNZ3 666 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 WDR45BQ5MNZ6 344 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 IRF7Q92985 503 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 POP5Q969H6 163 aaKnown RBP16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 SPATA9Q9BWV2 254 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 HCAR1Q9BXC0 346 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 RNF32Q9H0A6 362 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 SLC28A3Q9HAS3 691 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 ENAMQ9NRM1 1142 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 RBFOX1Q9NWB1 397 aaKnown RBP16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 KIAA0355O15063 1070 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 ACP5P13686 325 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 PXNP49023 591 aaPredicted RBP16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 SP3Q02447 781 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 PDE7AQ13946 482 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 GPR176Q14439 515 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 C6orf132Q5T0Z8 1188 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 CAMKMTQ7Z624 323 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 SIRT6Q8N6T7 355 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 GDPD1Q8N9F7 314 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 OR4Q3Q8NH05 313 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 GOT1L1Q8NHS2 421 aaPredicted RBP16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 RHBGQ9H310 441 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 H2AFY2Q9P0M6 372 aaPredicted RBP16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 DIMT1Q9UNQ2 313 aaKnown RBP16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 KCNK6Q9Y257 313 aa16.02■□□□□ 0.16
PPP4R3A-208ENST00000555462 CENPVL1A0A0U1RR11 272 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 ERI3O43414 337 aaKnown RBP16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 RPLP2P05387 115 aaKnown RBP16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 EIF4EP06730 217 aaKnown RBP16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 SOX9P48436 509 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 VSX2P58304 361 aaPredicted RBP16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 IRF5Q13568 498 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZMYND11Q15326 602 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 CLPPQ16740 277 aaPredicted RBP16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZNF628Q5EBL2 1059 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 MZT2BQ6NZ67 158 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 SPRED2Q7Z698 418 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 C12orf40Q86WS4 652 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 SERPINA12Q8IW75 414 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 NEURL3Q96EH8 262 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 MSANTD3Q96H12 275 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 MAGEB10Q96LZ2 347 aaPredicted RBP16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZDHHC5Q9C0B5 715 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 KCND3Q9UK17 655 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 RASD1Q9Y272 281 aa16.02■□□□□ 0.15
PPP4R3A-208ENST00000555462 RTTNQ86VV8 2226 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 A0A1W2PRG6 482 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 ITGB7P26010 798 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 PPP2R1BP30154 601 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 MC3RP41968 323 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 DCDC1P59894 354 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 GPR135Q8IZ08 494 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 TBC1D19Q8N5T2 526 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 OR11H4Q8NGC9 324 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 SLA2Q9H6Q3 261 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 ATP13A2Q9NQ11 1180 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 LHX9Q9NQ69 397 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 ENOPH1Q9UHY7 261 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 ANKRD61A6NGH8 418 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 SLC25A35Q3KQZ1 300 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 LHX8Q68G74 356 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZC3H14Q6PJT7 736 aaKnown RBP16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZFAND1Q8TCF1 268 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 TRMT2BQ96GJ1 504 aaKnown RBP16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 GDF15Q99988 308 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 DPH1Q9BZG8 443 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 MED28Q9H204 178 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 SF3B6Q9Y3B4 125 aaKnown RBP16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 ATG4BQ9Y4P1 393 aa16.01■□□□□ 0.15
PPP4R3A-208ENST00000555462 BSGP35613 385 aa16■□□□□ 0.15
PPP4R3A-208ENST00000555462 POU6F2P78424 691 aaPredicted RBP16■□□□□ 0.15
PPP4R3A-208ENST00000555462 RPA4Q13156 261 aa16■□□□□ 0.15
PPP4R3A-208ENST00000555462 KCNC3Q14003 757 aa16■□□□□ 0.15
PPP4R3A-208ENST00000555462 MEDAGQ5VYS4 303 aa16■□□□□ 0.15
PPP4R3A-208ENST00000555462 SFRP4Q6FHJ7 346 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms