RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 NTMQ9P121 344 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 MAPRE3Q9UPY8 281 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 C15orf41Q9Y2V0 281 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 UNC79Q9P2D8 2635 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 E9PLN8 166 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 AQP7O14520 342 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 SDHDO14521 159 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 SNPHO15079 494 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 SUSD5O60279 629 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 ACP2P11117 423 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 PRPS2P11908 318 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
SNX6-203ENST00000555416 MAPK1P28482 360 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 GABRA3P34903 492 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 GPC1P35052 558 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 MASP1P48740 699 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 PRKAG1P54619 331 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 GAS1P54826 345 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 EIPR1Q53HC9 387 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 OR5M10Q6IEU7 315 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 ZAR1Q86SH2 424 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 HOMEZQ8IX15 550 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 NUP43Q8NFH3 380 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 PIK3R3Q92569 461 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 HOXB13Q92826 284 aaPredicted RBP12.48□□□□□ -0.41
SNX6-203ENST00000555416 COQ8BQ96D53 544 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 ZBED6CLQ96FA7 236 aaPredicted RBP12.48□□□□□ -0.41
SNX6-203ENST00000555416 C16orf58Q96GQ5 468 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 VKORC1Q9BQB6 163 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 YIPF4Q9BSR8 244 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 LDAHQ9H6V9 325 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 ACKR4Q9NPB9 350 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 SERHLQ9NQF3 203 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 ASIC5Q9NY37 505 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 KLRF1Q9NZS2 232 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 SUCOQ9UBS9 1254 aaKnown RBP12.48□□□□□ -0.41
SNX6-203ENST00000555416 MARCOQ9UEW3 520 aaPredicted RBP12.48□□□□□ -0.41
SNX6-203ENST00000555416 SLC6A5Q9Y345 797 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 OR10H1Q9Y4A9 318 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 FAM215AQ9Y5M1 114 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 CELSR2Q9HCU4 2923 aa12.48□□□□□ -0.41
SNX6-203ENST00000555416 NUP214P35658 2090 aaPredicted RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 A0A1W2PRB8 838 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 KDM4EB2RXH2 506 aaPredicted RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 ANKRD28O15084 1053 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 HCN1O60741 890 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 TRAPPC6AO75865 159 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 C6orf47O95873 294 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 HPNP05981 417 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 IFI6P09912 130 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 ALDOCP09972 364 aaKnown RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 IL12BP29460 328 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 DCTP40126 519 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 PNLIPRP2P54317 469 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 WNT3P56703 355 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 CLDN8P56748 225 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 RPP38P78345 283 aaKnown RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 PHC1P78364 1004 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 OCRLQ01968 901 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 CYP27C1Q4G0S4 372 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 WIPI1Q5MNZ9 446 aaPredicted RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 EXOSC6Q5RKV6 272 aaKnown RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 DCST1Q5T197 706 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 CPTPQ5TA50 214 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 MFSD12Q6NUT3 480 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 SLC30A6Q6NXT4 461 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 PAOXQ6QHF9 649 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 SZRD1Q7Z422 152 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 MAVSQ7Z434 540 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 R3HCC1LQ7Z5L2 792 aaKnown RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 GALNT10Q86SR1 603 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 YRDCQ86U90 279 aaKnown RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 ZNF808Q8N4W9 903 aaPredicted RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 SLC16A11Q8NCK7 471 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 ZFP28Q8NHY6 868 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 NEIL3Q8TAT5 605 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 FAM120BQ96EK7 910 aaKnown RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 WDR55Q9H6Y2 383 aaPredicted RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 CXorf36Q9H7Y0 433 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 MEAF6Q9HAF1 191 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 FBXO34Q9NWN3 711 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 QPCTLQ9NXS2 382 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 NKIRAS1Q9NYS0 192 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 NOP53Q9NZM5 478 aaKnown RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 FBXL2Q9UKC9 423 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 CBLCQ9ULV8 474 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 EIF3LQ9Y262 564 aaKnown RBP12.47□□□□□ -0.41
SNX6-203ENST00000555416 CENPEQ02224 2701 aa12.47□□□□□ -0.41
SNX6-203ENST00000555416 OR14I1A6ND48 311 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 EMC8O43402 210 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 FADS1O60427 444 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 NKX2-2O95096 273 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 IL33O95760 270 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 KITP10721 976 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 PRPS1L1P21108 318 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 RFX3P48380 749 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 NUP107P57740 925 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 C21orf58P58505 322 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms