RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TRAPPC5Q8IUR0 188 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 KRT78Q8N1N4 520 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 VN1R2Q8NFZ6 395 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 OR5M3Q8NGP4 307 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 NEIL3Q8TAT5 605 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 MYLIPQ8WY64 445 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 FOXJ1Q92949 421 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 TRIM43Q96BQ3 446 aaPredicted RBP10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 LRR1Q96L50 414 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 NECTIN4Q96NY8 510 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 NLNQ9BYT8 704 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 B3GNT4Q9C0J1 378 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 CYSLTR2Q9NS75 346 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 KLF15Q9UIH9 416 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 MAB21L2Q9Y586 359 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 CACNG2Q9Y698 323 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 KDM4EB2RXH2 506 aaPredicted RBP10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 SLC28A2O43868 658 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 NME6O75414 186 aaPredicted RBP10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 NFATC1O95644 943 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 IFNA16P05015 189 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 ZP3P21754 424 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 KELP23276 732 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 WEE1P30291 646 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 BMP8BP34820 402 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 HSD17B2P37059 387 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 CLCNKAP51800 687 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 AGFG1P52594 562 aaKnown RBP10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 GBX2P52951 348 aaPredicted RBP10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 RPA4Q13156 261 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 NFE2L1Q14494 772 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 TMEM52BQ4KMG9 183 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 RAET1GQ6H3X3 334 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 ADNP2Q6IQ32 1131 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 TMIGD1Q6UXZ0 262 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 PLEKHM3Q6ZWE6 761 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 OTOP2Q7RTS6 562 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 TRMT11Q7Z4G4 463 aaKnown RBP10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 BMP8AQ7Z5Y6 402 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 ADGRD2Q7Z7M1 963 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF655Q8N720 491 aaPredicted RBP10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 SYT14Q8NB59 555 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 OR4K1Q8NGD4 311 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 OR2L2Q8NH16 312 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 OR52N1Q8NH53 320 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 NR4A3Q92570 626 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 RAD51AP1Q96B01 352 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 NXPE2Q96DL1 559 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 RNFT2Q96EX2 444 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 WACQ9BTA9 647 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 ACTR6Q9GZN1 396 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 BTBD1Q9H0C5 482 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 HDHD2Q9H0R4 259 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 OR2AG1Q9H205 316 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 MTG2Q9H4K7 406 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 C11orf49Q9H6J7 331 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 RHCGQ9UBD6 479 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 DPP7Q9UHL4 492 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 MAP4K5Q9Y4K4 846 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 MEIKINA0A087WXM9 373 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 A0A1W2PRB8 838 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 GABRPO00591 440 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 TBX19O60806 448 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SH3BGRLO75368 114 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 POP7O75817 140 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 PAPLNO95428 1278 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 TGFB1P01137 390 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 UGT2B7P16662 529 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 AHCYP23526 432 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ACADLP28330 430 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 AVPR1BP47901 424 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 MTNR1AP48039 350 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 KCNJ5P48544 419 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 EXOSC2Q13868 293 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 GINS1Q14691 196 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SNAPC1Q16533 368 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 POM121L1PQ3SYA9 428 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 PRAMEF14Q5SWL7 426 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 GARNL3Q5VVW2 1013 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 PRAMEF13Q5VWM6 474 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 HBMQ6B0K9 141 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 PYHIN1Q6K0P9 492 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 C1orf94Q6P1W5 598 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 MARCH9Q86YJ5 346 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 POGLUT1Q8NBL1 392 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ADAMTS14Q8WXS8 1223 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 RFKQ969G6 155 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 NEURL3Q96EH8 262 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 MSANTD3Q96H12 275 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SENP5Q96HI0 755 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SLC38A2Q96QD8 506 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF607Q96SK3 696 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 TM9SF2Q99805 663 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ABCG5Q9H222 651 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 OR51J1Q9H342 316 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SLCO1C1Q9NYB5 712 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 EXTL2Q9UBQ6 330 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms