RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NPIPA5A0A0B4J1W7 369 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 NPIPA7E9PJI5 369 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 KLK10O43240 276 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 COQ9O75208 318 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 H6PDO95479 791 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ATP6V1G2O95670 118 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ZNF682O95780 498 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 NPIPA8P0DM63 369 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 CT45A8P0DMV1 189 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 CT45A9P0DMV2 189 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 KDELR2P33947 212 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 GALNSP34059 522 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 PCBP3P57721 371 aaKnown RBP9.97□□□□□ -0.81
TDP1-211ENST00000555178 RCN1Q15293 331 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ZNF630Q2M218 657 aaPredicted RBP9.97□□□□□ -0.81
TDP1-211ENST00000555178 GPAT3Q53EU6 434 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 CT45A2Q5DJT8 189 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 PROSER1Q86XN7 944 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 PRR22Q8IZ63 422 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ADGRG5Q8IZF4 528 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 CDRT4Q8N9R6 151 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 SMYD1Q8NB12 490 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 OR1N1Q8NGS0 311 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 GPR151Q8TDV0 419 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 RMND5BQ96G75 393 aaPredicted RBP9.97□□□□□ -0.81
TDP1-211ENST00000555178 SPATA9Q9BWV2 254 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 GORASP2Q9H8Y8 452 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 AURKCQ9UQB9 309 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 PRRC2CQ9Y520 2896 aaKnown RBP9.96□□□□□ -0.81
TDP1-211ENST00000555178 TPST1O60507 370 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 PRKD3O94806 890 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 PGM3O95394 542 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 IGKV1D-16P01601 117 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 ALOX5P09917 674 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 ITGAMP11215 1152 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 TNFRSF1BP20333 461 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 ITPKBP27987 946 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 RHDQ02161 417 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 CHRNEQ04844 493 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 VEZF1Q14119 521 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 BTBD16Q32M84 506 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 REEP3Q6NUK4 255 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 C16orf62Q7Z3J2 963 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 COMTD1Q86VU5 262 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 C10orf67Q8IYJ2 551 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 COX18Q8N8Q8 333 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 B3GNT7Q8NFL0 401 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 TNIP2Q8NFZ5 429 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 HOXB13Q92826 284 aaPredicted RBP9.96□□□□□ -0.82
TDP1-211ENST00000555178 DAZLQ92904 295 aaKnown RBP9.96□□□□□ -0.82
TDP1-211ENST00000555178 ADIPOR1Q96A54 375 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 NXF5Q9H1B4 397 aaKnown RBP9.96□□□□□ -0.82
TDP1-211ENST00000555178 SLC38A1Q9H2H9 487 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 MUC13Q9H3R2 512 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 PIGUQ9H490 435 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 DCAF13Q9NV06 445 aaKnown RBP9.96□□□□□ -0.82
TDP1-211ENST00000555178 GIN1Q9NXP7 522 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 MKLN1Q9UL63 735 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 PADI2Q9Y2J8 665 aa9.96□□□□□ -0.82
TDP1-211ENST00000555178 CACNA1GO43497 2377 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 HEATR5AQ86XA9 2040 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 TRBV11-1A0A0K0K1C0 115 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 DHRS12A0PJE2 317 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 C5orf58C9J3I9 102 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 M0QX08 132 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 ASNA1O43681 348 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 RBBP4Q09028 425 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 BIKQ13323 160 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 EBPQ15125 230 aaKnown RBP9.95□□□□□ -0.82
TDP1-211ENST00000555178 GLIPR1L2Q4G1C9 344 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 DCST2Q5T1A1 773 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 HEPHL1Q6MZM0 1159 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 STMN2Q93045 179 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 TPD52L3Q96J77 140 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 LPAR4Q99677 370 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 LMF2Q9BU23 707 aaKnown RBP9.95□□□□□ -0.82
TDP1-211ENST00000555178 SEMA4CQ9C0C4 833 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 S100A14Q9HCY8 104 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 PPIEQ9UNP9 301 aaKnown RBP9.95□□□□□ -0.82
TDP1-211ENST00000555178 ANGPT4Q9Y264 503 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 PIEZO2Q9H5I5 2752 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 AQP12BA6NM10 295 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 DYRK3O43781 588 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 GMNNO75496 209 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 DNAJB5O75953 348 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 NKX2-2O95096 273 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 STAMBPO95630 424 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 IFI6P09912 130 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 CLCN2P51788 898 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 RNF4P78317 190 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 RAPSNQ13702 412 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 CYBRD1Q53TN4 286 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 B3GNTL1Q67FW5 361 aaPredicted RBP9.95□□□□□ -0.82
TDP1-211ENST00000555178 FRRS1Q6ZNA5 592 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 NDUFAF7Q7L592 441 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 AQP12AQ8IXF9 295 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 LILRA2Q8N149 483 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 MORN4Q8NDC4 146 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 OR7G1Q8NGA0 311 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 ELP5Q8TE02 316 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms