RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ILDR1Q86SU0 546 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SUMF2Q8NBJ7 301 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF439Q8NDP4 499 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ACOT11Q8WXI4 607 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 MOAP1Q96BY2 351 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 HHIPL1Q96JK4 782 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SFXN1Q9H9B4 322 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PTTG2Q9NZH5 202 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 GNG12Q9UBI6 72 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 OR1A2Q9Y585 309 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PIAS3Q9Y6X2 628 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 E7ESA3 106 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TUSC2O75896 110 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 HOXD8P13378 290 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TACR3P29371 465 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 HOXD11P31277 338 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 RPS18P62269 152 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 FADDQ13158 208 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 NR0B2Q15466 257 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 FBXW12Q6X9E4 464 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 C3orf58Q8NDZ4 430 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 OR52P1PQ8NH57 321 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TCTEX1D2Q8WW35 142 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 BIRC7Q96CA5 298 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CRB3Q9BUF7 120 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TEX10Q9NXF1 929 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 COQ3Q9NZJ6 369 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SCML2Q9UQR0 700 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SPTBN2O15020 2390 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 WASH4PA8MWX3 477 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PPP1R3DO95685 299 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 DBHP09172 617 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PABPC4LP0CB38 370 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CHRNB2P17787 502 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 GSK3BP49841 420 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TAS2R20P59543 309 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF92Q03936 586 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 GTF3C1Q12789 2109 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 KHDC1Q4VXA5 237 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 OGFOD3Q6PK18 319 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM104Q8NE00 496 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 DMBX1Q8NFW5 382 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 NR4A3Q92570 626 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 DNAJC19Q96DA6 116 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF845Q96IR2 970 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ELF4Q99607 663 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 WWTR1Q9GZV5 400 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PIGBOS1A0A0B4J2F0 54 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 C2CD4BA6NLJ0 364 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 NRP1O14786 923 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SPATA31C1P0DKV0 1188 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ITGB8P26012 769 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 GABRA4P48169 554 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 LGALS4P56470 323 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 LIPJQ5W064 366 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CLEC20AQ6ZU45 233 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 YTHDF3Q7Z739 585 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 OR5L1Q8NGL2 311 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 FAM122AQ96E09 287 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SOCS6O14544 535 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 LRCH4O75427 683 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SPDEFO95238 335 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 GAAP10253 952 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 LIPCP11150 499 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF30P17039 623 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CD9P21926 228 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PTGER4P35408 488 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 THBS3P49746 956 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 GRB2P62993 217 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SPANXN4Q5MJ08 99 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 MEX3DQ86XN8 651 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 RNF175Q8N4F7 328 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 OR4F6Q8NGB9 312 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SGK3Q96BR1 496 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 MUCL1Q96DR8 90 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 LRCH3Q96II8 777 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 FAM173AQ9BQD7 235 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 MTG2Q9H4K7 406 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM248Q9NWD8 314 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 WIF1Q9Y5W5 379 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 A0A1W2PPV4 95 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 EMC8O43402 210 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MTHFD2P13995 350 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 UBE2G2P60604 165 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 GAB1Q13480 694 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PCGF3Q3KNV8 242 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 NIPAL1Q6NVV3 410 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 GTPBP8Q8N3Z3 284 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 LRRC18Q8N456 261 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 IL17FQ96PD4 163 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 NKX2-4Q9H2Z4 354 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SEMA6CQ9H3T2 930 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 FAM120CQ9NX05 1096 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 GIMAP2Q9UG22 337 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 F8W036 122 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 GCGRP47871 477 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 RPL23AP62750 156 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 BLOC1S1P78537 153 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 HNF4GQ14541 408 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms