RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PURGQ9UJV8 347 aaKnown RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 SPATA2Q9UM82 520 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 CSAG2Q9Y5P2 127 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 MFSD2BA6NFX1 497 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 LRRC30A6NM36 301 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 E9PMD0 336 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 H3BTX0 84 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 SGK494L7N484 410 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 PDLIM1O00151 329 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TM7SF2O76062 418 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 THRBP10828 461 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CAPN2P17655 700 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TNNI3P19429 210 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 ATP6V1C1P21283 382 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 IDSP22304 550 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 GATA2P23769 480 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-213ENST00000554776 DPP4P27487 766 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 SHC1P29353 583 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 PRELPP51888 382 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 SLC8A3P57103 927 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CNTN2Q02246 1040 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 COX10Q12887 443 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 SNTB2Q13425 540 aaKnown RBP2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CRMP1Q14194 572 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 EIF2B1Q14232 305 aaKnown RBP2.47□□□□□ -2.01
SCFD1-213ENST00000554776 RAB35Q15286 201 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CHI3L2Q15782 390 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 UBE2V2Q15819 145 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CAMK4Q16566 473 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CDKN3Q16667 212 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CCDC57Q2TAC2 916 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CNPY1Q3B7I2 92 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 C14orf28Q4W4Y0 310 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TCTEX1D4Q5JR98 221 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 RIPPLY2Q5TAB7 128 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 NCR3LG1Q68D85 454 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 SPINK14Q6IE38 97 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CES3Q6UWW8 571 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 ABRAXAS1Q6UWZ7 409 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CYS1Q717R9 158 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CBWD2Q8IUF1 395 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 CENPLQ8N0S6 344 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-213ENST00000554776 C17orf47Q8NEP4 570 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 OR2T34Q8NGX1 318 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 RFESDQ8TAC1 157 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 THRSPQ92748 146 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 ADIPOR1Q96A54 375 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 C18orf25Q96B23 403 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TADA1Q96BN2 335 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 VPS39Q96JC1 886 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TTC25Q96NG3 672 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 VPS35Q96QK1 796 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 ATF6BQ99941 703 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 SOSTQ9BQB4 213 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TTYH2Q9BSA4 534 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TBCDQ9BTW9 1192 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TEX13BQ9BXU2 312 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 MRPL13Q9BYD1 178 aaKnown RBP2.47□□□□□ -2.01
SCFD1-213ENST00000554776 TMEM117Q9H0C3 514 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 PANK3Q9H999 370 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 GPN2Q9H9Y4 310 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-213ENST00000554776 GNB4Q9HAV0 340 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 AATFQ9NY61 560 aaKnown RBP eCLIP2.47□□□□□ -2.01
SCFD1-213ENST00000554776 KLRF1Q9NZS2 232 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 RNF24Q9Y225 148 aa2.47□□□□□ -2.01
SCFD1-213ENST00000554776 A0A1B0GWJ7 208 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 FAM74A7A6NL05 159 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 C11orf98E9PRG8 122 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 CPLX1O14810 134 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 PHF1O43189 567 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-213ENST00000554776 GALR3O60755 368 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-213ENST00000554776 NUDT14O95848 222 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 RENP00797 406 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 MT-ND1P03886 318 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 KRT6BP04259 564 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 ASNSP08243 561 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 MELTFP08582 738 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 HOXB7P09629 217 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 CLUP10909 449 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 DRD5P21918 477 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 AXLP30530 894 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 SOX6P35712 828 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 MAGEA5P43359 124 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 IFNAR2P48551 515 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 KRT6CP48668 564 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 PGFP49763 221 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 ARHGDIAP52565 204 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 LTB4RQ15722 352 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 ZIC1Q15915 447 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 MAPK6Q16659 721 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 ANKDD1AQ495B1 522 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 NADK2Q4G0N4 442 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 FAM74A3Q4VXF1 159 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 TMEM41BQ5BJD5 291 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 MS4A13Q5J8X5 152 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 NHLRC3Q5JS37 347 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 REP15Q6BDI9 236 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 NIPAL3Q6P499 406 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 BLOC1S2Q6QNY1 142 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms