RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ALG12Q9BV10 488 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 FAM192AQ9GZU8 254 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 METTL7AQ9H8H3 244 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 WDR76Q9H967 626 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 NMUR1Q9HB89 426 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 ETNK2Q9NVF9 386 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 UTP6Q9NYH9 597 aaKnown RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 THYN1Q9P016 225 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 NIP7Q9Y221 180 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 AP4B1Q9Y6B7 739 aa4.02□□□□□ -1.77
SCFD1-211ENST00000554437 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.02□□□□□ -1.77
SCFD1-211ENST00000554437 SF3B1O75533 1304 aaKnown RBP eCLIP4.01□□□□□ -1.776e-6■■■■■ 31.6
SCFD1-211ENST00000554437 A0A075B6Q4 140 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 A0A0U1RQS6 177 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 LOC390937A0A1W2PQ73 354 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 OR5H15A6NDH6 313 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 SRRM4A7MD48 611 aaKnown RBP4.01□□□□□ -1.77
SCFD1-211ENST00000554437 POLR2DO15514 142 aaKnown RBP4.01□□□□□ -1.77
SCFD1-211ENST00000554437 NME2P1O60361 137 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 PROS1P07225 676 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 FOLR2P14207 255 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 NCF2P19878 526 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-211ENST00000554437 STIP1P31948 543 aaKnown RBP4.01□□□□□ -1.77
SCFD1-211ENST00000554437 ADRA1AP35348 466 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 OR1G1P47890 313 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 ZFP36L2P47974 494 aaKnown RBP4.01□□□□□ -1.77
SCFD1-211ENST00000554437 RPS27AP62979 156 aaKnown RBP4.01□□□□□ -1.77
SCFD1-211ENST00000554437 RIGQ13278 110 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 ITPK1Q13572 414 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 STK11Q15831 433 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 C9orf66Q5T8R8 295 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 CD164L2Q6UWJ8 174 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 ZNF730Q6ZMV8 503 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 BNIPLQ7Z465 357 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 ADGRD2Q7Z7M1 963 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 ZNF321PQ8N8H1 164 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 ZNF397Q8NF99 534 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-211ENST00000554437 OR1B1Q8NGR6 318 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 PEX13Q92968 403 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 RASD2Q96D21 266 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 SENP8Q96LD8 212 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 RCHY1Q96PM5 261 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 RBM24Q9BX46 236 aaKnown RBP4.01□□□□□ -1.77
SCFD1-211ENST00000554437 EXO5Q9H790 373 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 VCPKMTQ9H867 229 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 AGPAT5Q9NUQ2 364 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 PLEK2Q9NYT0 353 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 VPS54Q9P1Q0 977 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 SUN2Q9UH99 717 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 RARRES3Q9UL19 164 aa4.01□□□□□ -1.77
SCFD1-211ENST00000554437 TRBV5-4A0A0C4DH59 114 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 TMEM89A2RUT3 159 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 RPL37AP8A6NKH3 93 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 DNALI1O14645 258 aaPredicted RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 CHUKO15111 745 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 ADAM12O43184 909 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 SNNO75324 88 aaPredicted RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 WBP4O75554 376 aaKnown RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 HPP00738 406 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 AGTP01019 485 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 CHRNGP07510 517 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 STAG3L3P0CL85 134 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 PAX7P23759 505 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 HTR2AP28223 471 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 CHI3L1P36222 383 aaPredicted RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 SLC1A4P43007 532 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 SLC1A6P48664 564 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 FHITP49789 147 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 SUCLG1P53597 346 aaKnown RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 SPAG1Q07617 926 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 SRSF5Q13243 272 aaKnown RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 DOC2AQ14183 400 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 FASTKQ14296 549 aaKnown RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 RFTN1Q14699 578 aaPredicted RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 SPHARQ15513 63 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 ANKRD55Q3KP44 614 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 KRT71Q3SY84 523 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 POM121L1PQ3SYA9 428 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 PHYHD1Q5SRE7 291 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 ARMC12Q5T9G4 340 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 IL23RQ5VWK5 629 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 FAM159AQ6UWV7 190 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 CYP4V2Q6ZWL3 525 aaPredicted RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 TMUB2Q71RG4 321 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 ERASQ7Z444 233 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 TMCO2Q7Z6W1 182 aaPredicted RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 FAM228AQ86W67 206 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 GCNT2Q8N0V5 402 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 CCDC197Q8NCU1 140 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 SLC41A3Q96GZ6 507 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 C4orf36Q96KX1 117 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 MRPL13Q9BYD1 178 aaKnown RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 NACA2Q9H009 215 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 XKR8Q9H6D3 395 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 MIS18AQ9NYP9 233 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 PSORS1C1Q9UIG5 152 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 KIAA1257Q9ULG3 409 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 MGAT4AQ9UM21 535 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 MRPS33Q9Y291 106 aaKnown RBP4□□□□□ -1.77
SCFD1-211ENST00000554437 MRPS2Q9Y399 296 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms