RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SF3B4Q15427 424 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 ARL13AQ5H913 290 aaPredicted RBP9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 RIPPLY2Q5TAB7 128 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 VASNQ6EMK4 673 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 ANGPTL8Q6UXH0 198 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 NPSR1Q6W5P4 371 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 Q6ZSR9 355 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 ULK2Q8IYT8 1036 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 CLYBLQ8N0X4 340 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR2T11Q8NH01 316 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TCP10LQ8TDR4 215 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TMBIM1Q969X1 311 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 MTERF3Q96E29 417 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 C14orf79Q96F83 325 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 GNRHR2Q96P88 292 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 NODALQ96S42 347 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TRIM8Q9BZR9 551 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 PRDM14Q9GZV8 571 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TUBB1Q9H4B7 451 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 ANKRA2Q9H9E1 313 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 KCNJ16Q9NPI9 418 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 DDX18Q9NVP1 670 aaKnown RBP9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 KLRF1Q9NZS2 232 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 SLC17A7Q9P2U7 560 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TNFRSF10DQ9UBN6 386 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TRAF6Q9Y4K3 522 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 PTGDR2Q9Y5Y4 395 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 MED12Q93074 2177 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 UPK1AO00322 258 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 PDPK1O15530 556 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TYROBPO43914 113 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 SPAG7O75391 227 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 REM1O75628 298 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 CBR3O75828 277 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TRAPPC6AO75865 159 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TOXO94900 526 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ACTL6AO96019 429 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TACR1P25103 407 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 MSX1P28360 303 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 IL12BP29460 328 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 SSTR2P30874 369 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 GCKP35557 465 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 MC3RP41968 323 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 FRKP42685 505 aaPredicted RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ASMTP46597 345 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZFP36L2P47974 494 aaKnown RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TRPC1P48995 793 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 PSG6Q00889 435 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZNF155Q12901 538 aaPredicted RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 PDE7AQ13946 482 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZNHIT3Q15649 155 aaPredicted RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 PRSS53Q2L4Q9 553 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 SLC25A35Q3KQZ1 300 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 UGT3A2Q3SY77 523 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 CYP27C1Q4G0S4 372 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ACSF3Q4G176 576 aaPredicted RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 XKR7Q5GH72 579 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TMEM107Q6UX40 140 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 LARP4Q71RC2 724 aaKnown RBP eCLIP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 LACC1Q8IV20 430 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 CCDC71Q8IV32 467 aaPredicted RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR6Y1Q8NGX8 325 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZFP28Q8NHY6 868 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TWIST2Q8WVJ9 160 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ELP4Q96EB1 424 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZBED6CLQ96FA7 236 aaPredicted RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 EGLN2Q96KS0 407 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 PPP3R2Q96LZ3 170 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ADOQ96SZ5 270 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TIMP4Q99727 224 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 MECRQ9BV79 373 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR2B2Q9GZK3 357 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 GLIPR2Q9H4G4 154 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 REEP4Q9H6H4 257 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 GALNT9Q9HCQ5 603 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 SSU72Q9NP77 194 aaKnown RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 RAB21Q9UL25 225 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 ABCG2Q9UNQ0 655 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 MRPS18CQ9Y3D5 142 aaKnown RBP9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 FIS1Q9Y3D6 152 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 WIF1Q9Y5W5 379 aa9.49□□□□□ -0.89
PTCD2P1-201ENST00000554393 TACC2O95359 2948 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 A0A0G2JNJ9 132 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 FAM90A27PA6NNH2 459 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 HSPB2A8KAH6 182 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 TMEM114B3SHH9 223 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 GNB5O14775 395 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 EPPINO95925 133 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 BPGMP07738 259 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 LINC00032P0C843 101 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 MAPK1P28482 360 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 TIMP3P35625 211 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 RPL3P39023 403 aaKnown RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 ETV4P43268 484 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 PSMD4P55036 377 aaKnown RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 RPL38P63173 70 aaKnown RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZNF844Q08AG5 666 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 HSPB2Q16082 182 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 RFTN2Q52LD8 501 aaPredicted RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 EIPR1Q53HC9 387 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms