RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 DMRTA2Q96SC8 542 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 ANGPTL4Q9BY76 406 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 TP63Q9H3D4 680 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-211ENST00000554310 REEP4Q9H6H4 257 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 METTL7AQ9H8H3 244 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 FOLH1BQ9HBA9 442 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 HAO1Q9UJM8 370 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 KLF2Q9Y5W3 355 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-211ENST00000554310 LIPGQ9Y5X9 500 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 NCKAP5O14513 1909 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 OR6C70A6NIJ9 312 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 PLOD2O00469 737 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ADAM10O14672 748 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ZNHIT1O43257 154 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 SUSD5O60279 629 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 MGRN1O60291 552 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 LRATO95237 230 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 PSMG1O95456 288 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 CELA3AP09093 270 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 KITP10721 976 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 BCKDHAP12694 445 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ELAVL4P26378 380 aaKnown RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 HPCAL1P37235 193 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 RPL3P39023 403 aaKnown RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 CASP3P42574 277 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 MASP1P48740 699 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 MAN2A2P49641 1150 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ELF3P78545 371 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ZNF155Q12901 538 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 SNTA1Q13424 505 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ART3Q13508 389 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 RIPK1Q13546 671 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 SLC10A1Q14973 349 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 PRSS53Q2L4Q9 553 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 SLC30A6Q6NXT4 461 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 XKRXQ6PP77 449 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 TMEM107Q6UX40 140 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 PACS2Q86VP3 889 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 KIRREL3Q8IZU9 778 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 OR2L13Q8N349 312 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ZFP28Q8NHY6 868 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 PPCDCQ96CD2 204 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 SLC7A6OSQ96CW6 309 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 MTERF3Q96E29 417 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 SLC35A4Q96G79 324 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 TMEM41AQ96HV5 264 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 JSRP1Q96MG2 331 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 TSSK3Q96PN8 268 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 GLIPR2Q9H4G4 154 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ANKRA2Q9H9E1 313 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ACKR4Q9NPB9 350 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 DDX18Q9NVP1 670 aaKnown RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 MARCOQ9UEW3 520 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 C19orf53Q9UNZ5 99 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-211ENST00000554310 ITPR2Q14571 2701 aa11.97□□□□□ -0.49
SHMT2-211ENST00000554310 TRGV5A0A0B4J1U4 118 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 PRAMEF25A6NGN4 478 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 FIGNL2A6NMB9 653 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 ZNF195O14628 629 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 UGT2B11O75310 529 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 RFPL3SP0C7P2 107 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 CT45A8P0DMV1 189 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 CT45A9P0DMV2 189 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 CALB2P22676 271 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 GDF1P27539 372 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 KRT20P35900 424 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 MRPS22P82650 360 aaKnown RBP11.96□□□□□ -0.49
SHMT2-211ENST00000554310 EFR3AQ14156 821 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 CT45A2Q5DJT8 189 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 BICRALQ6AI39 1079 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 NPSR1Q6W5P4 371 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 R3HCC1LQ7Z5L2 792 aaKnown RBP11.96□□□□□ -0.49
SHMT2-211ENST00000554310 CLHC1Q8NHS4 586 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 GFM2Q969S9 779 aaKnown RBP11.96□□□□□ -0.49
SHMT2-211ENST00000554310 TMBIM1Q969X1 311 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 SARAFQ96BY9 339 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 NTNG2Q96CW9 530 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 ELP4Q96EB1 424 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 ZBED6CLQ96FA7 236 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-211ENST00000554310 COL21A1Q96P44 957 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 OSBPL11Q9BXB4 747 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 NMUR2Q9GZQ4 415 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 UBQLN3Q9H347 655 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 LDAHQ9H6V9 325 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 EXO5Q9H790 373 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 ARL8BQ9NVJ2 186 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 PNPOQ9NVS9 261 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 KLRF1Q9NZS2 232 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 ZDHHC2Q9UIJ5 367 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-211ENST00000554310 C15orf41Q9Y2V0 281 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 RAP2CQ9Y3L5 183 aa11.96□□□□□ -0.49
SHMT2-211ENST00000554310 PHF3Q92576 2039 aaKnown RBP11.96□□□□□ -0.5
SHMT2-211ENST00000554310 ABCA12Q86UK0 2595 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 TTC36A6NLP5 189 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 PRSS44E7EML9 344 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 NPIPA2E9PIF3 369 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 NPIPA3F8WFD2 350 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms